CX296828

Overview
NameCX296828
Unique NameCX296828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9479 contig Ccv1_Contig9479:33..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.121e-37
Identity = 91/231 (39.39%), Postives = 113/231 (48.92%), Query Frame = 2
Query:   89 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 679
            VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECE 247          

HSP 2 Score: 36.965 bits (84), Expect = 6.121e-37
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 1
Query:  694 GEQKYCATSLESMIDFS 744
            GE+KYCATSLESM+DFS
Sbjct:  253 GEEKYCATSLESMVDFS 269          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.575e-34
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 2
Query:  389 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKESR 703
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P  +  R
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGER 289          

HSP 2 Score: 33.8834 bits (76), Expect = 1.575e-34
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 1
Query:  694 GEQKYCATSLESMIDFST 747
            GE+K CATSLESM+DF+T
Sbjct:  287 GERKACATSLESMVDFAT 304          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.304e-18
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  452 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 679
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECE 96          

HSP 2 Score: 29.6462 bits (65), Expect = 1.304e-18
Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 1
Query:  694 GEQKYCATSLESMIDFS 744
            GE K CATSLESM++F+
Sbjct:  102 GEAKRCATSLESMVEFA 118          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.057e-17
Identity = 43/101 (42.57%), Postives = 56/101 (55.45%), Query Frame = 2
Query:  392 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIK 694
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P  K
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANK 182          

HSP 2 Score: 31.9574 bits (71), Expect = 1.057e-17
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  682 PWH*GEQKYCATSLESMIDF 741
            P + GE+K CATSLESM+DF
Sbjct:  179 PANKGEKKACATSLESMVDF 198          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.655e-17
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  428 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 679
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCE 135          

HSP 2 Score: 24.6386 bits (52), Expect = 6.655e-17
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  706 YCATSLESMID 738
            YCATSLESM++
Sbjct:  150 YCATSLESMVE 160          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.436e-16
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 2
Query:  443 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIK 694
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P  K
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANK 440          

HSP 2 Score: 31.5722 bits (70), Expect = 1.436e-16
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  682 PWH*GEQKYCATSLESMIDFST 747
            P + GE+K CATSLES++DF T
Sbjct:  437 PANKGEKKACATSLESIVDFVT 458          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.904e-16
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 2
Query:  404 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 679
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECE 133          

HSP 2 Score: 26.9498 bits (58), Expect = 1.904e-16
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  706 YCATSLESMIDF 741
            YCATSLESM++F
Sbjct:  147 YCATSLESMVEF 158          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.007e-15
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2
Query:  428 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 679
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECE 166          

HSP 2 Score: 26.1794 bits (56), Expect = 2.007e-15
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  697 EQKYCATSLESMIDFS 744
            + K+C TSLESM++F+
Sbjct:  175 QAKHCVTSLESMVEFA 190          
BLAST of CX296828 vs. ExPASy Swiss-Prot
Match: BURP7_ORYSJ (BURP domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=BURP7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2
Query:  470 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIM 655
            +FFLEKDL PG K+ LHFT+ + GA  L R  A S P +++KLPEI +Q SV  GS  A+ M
Sbjct:   64 VFFLEKDLFPGSKLTLHFTRATAGAALLPRGRADSVPLATEKLPEILSQLSVPAGSPAADAM 125          
The following BLAST results are available for this feature:
BLAST of CX296828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RD22_ARATH6.121e-3739.39Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ1.575e-3460.95BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP6_ORYSJ1.304e-1853.95BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP5_ORYSJ1.057e-1742.57BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP2_ORYSJ6.655e-1748.81BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURPH_ORYSJ1.436e-1647.73BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP1_ORYSJ1.904e-1645.65BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ2.007e-1550.59BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP7_ORYSJ5.547e-1153.23BURP domain-containing protein 7 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionC05803C07SK FerrChloL1 Citrus clementina cDNA clone C05803C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296828 ID=CX296828; Name=CX296828; organism=Citrus clementina; type=EST; length=749bp
CTTGTATTCTGGGTGTCTTTTAAACATACTCAAAGCTATAATGGAGTTTC
ACTTGTTGCCCATCCTTGCTTTCCTCAGTCTAGCACTGGTAGCAAGTCAT
GCTGACATTTCTCCTGAGCTTTACTGGAAAACTGTACTGCCAAATTCCCC
GATGCCAAAAGCTGTCAAAGATCTTCTACAGCCAGATGTGCTGGAAGACA
AAAGCACCTCTGTCAACGTAGGGAAGGGTGGTGTCAATGTGGATGCAGGG
AAAGGAAAGCCCGGTGGTGGCACCCATGTGAATGTTGGGGGTAAGGGCGT
TGGTGTAAACACTGGAAAGCCTGACAAAAGAACCAGTGTTGGTGTTGGCA
AAGGAGGAGTATCCGTAAGTACAGGACACAAGGGAAAGCCAGTTTATGTT
GGAGTAAGCCCATTCAACTATGTATATGCTGCAAATGAGAACCAACTCCA
TGATGACCCGAATACAGCTCTTTTCTTCTTGGAAAAGGACTTGCATCCTG
GCATGAAGATGAACTTGCACTTCACTCAAACTTCAAATGGAGCAACTTTC
TTATCTCGCCAAGCTGCCAAATCAACTCCTTTCTCGTCTGACAAATTGCC
TGAGATCTTTAACCAGTTTTCCGTGAAACCTGGATCAGTTGAAGCTGAAA
TAATGCAGAACACAATCAAAGAGTGTGAAGACCCTGGCATTAAGGAGAGC
AGAAATATTGTGCAACTTCACTGGAGTCAATGATTGACTTCAGCACTTC
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