CX296867

Overview
NameCX296867
Unique NameCX296867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX296867 vs. ExPASy Swiss-Prot
Match: NCS_THLFG (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  167 YKEKFIEIDNEKRVRVTDVVEGGYLDVGFTLFRVIFEIIEKGSDSCIIKSTIEYELREE 343
            YKEKFI +DNE R++   ++EGGYLD+G T +     ++  G DSC+IKS+ EY ++ E
Sbjct:  108 YKEKFILVDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSSTEYHVKPE 166
The following BLAST results are available for this feature:
BLAST of CX296867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NCS_THLFG5.574e-1147.46S-norcoclaurine synthase OS=Thalictrum flavum subs... [more]
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Properties
Property NameValue
Genbank descriptionC05803F12SK FerrChloL1 Citrus clementina cDNA clone C05803F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296867 ID=CX296867; Name=CX296867; organism=Citrus clementina; type=EST; length=647bp
TGTGCCAGCCGGCCAAGCTTGGGAACTCTATGGCACAATCAAATTGGTAA
AGCTTGTTGAAAAAGAGTATGATACCGTTGAAGAAATTGAAGTTGTTGAG
GGGGATGGAGGTGTTGGCACCATTCTTCACATCAAATTTAAACCAGGCAC
ACCGGGTTTTGCTGGTTACAAAGAGAAGTTCATCGAGATCGATAACGAGA
AACGAGTGAGAGTAACAGATGTTGTGGAAGGAGGGTATCTCGATGTGGGA
TTTACTCTATTTAGAGTGATATTTGAGATCATAGAGAAAGGGAGTGATTC
CTGCATCATCAAATCAACAATCGAGTATGAACTCAGAGAAGAAGCTGCTG
CTAATGCTTCCTTTGTGAGTATCGATACAGTGGCGAAGATTGCAGAAATC
TCCAAGAATTATCTCCTCAACAACAGGGATTAAGCTCAAGACTGTAAATC
ACCCATCTTCAATTATCCGCTCTCAGCAGCAACAAAGGCGATAACATCTC
AAGTATGGAATTGTAATGTTTTTCAGCTAAACTTTCAGTAAGATCCAGTG
TTTTACAGGAATAACGATTGTCACATATCAAGATCAATCTGATTTTATGT
TGGGCAATTTCTTGATGACAACTAANAAAAAAAAAAAAAAAAAAAAA
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