CX296873

Overview
NameCX296873
Unique NameCX296873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9358 contig Ccv1_Contig9358:732..1470. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 394.43 bits (1012), Expect = 3.279e-109
Identity = 185/245 (75.51%), Postives = 212/245 (86.53%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQ-PDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQ 734
            GSIFEG+MPKDL+IYVTTASNAQESS+GTYCPGM+PSPP EYITCLGDLYSVAWMEDSETHNLK+ETI QQY  VK RTSN+N Y+ GSHVMEYGN S+KSEKLYLYQGFDPA+ N P N+L    ++GVVNQRDADLLF+WHMY+ + +GS KK + LK++TET RHRKHLDAS+++I  ILFGP     +LN V   GLPLVDDW+CLKSMVRVFE HCGSLTQYGMKHMRAFAN+CN+GVS+
Sbjct:  214 GSIFEGIMPKDLNIYVTTASNAQESSYGTYCPGMNPSPPSEYITCLGDLYSVAWMEDSETHNLKKETIKQQYHTVKMRTSNYNTYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLPLNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPT--MNVLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSK 456          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 8.077e-108
Identity = 179/245 (73.06%), Postives = 214/245 (87.35%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPP-NKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQ 734
            GS+FEG+MPKDL+IYVTTASNAQE+S+GTYCPGMDPSPPPEYITCLGDLYSVAWMEDSE HNLKRE++ QQY++VK+RTSNFNNY  GSHVM+YG+T++ +EKLYLYQGFDPA+ NFPP N     +M VVNQRDA+L  +W MY+ +   SE K+++LKQI ET++HRKH+D S+++IGV+L+GP KGS +L SV A G  LVDDW CLKSMVRVFETHCG+LTQYGMKHMRAFANICNSGVS+
Sbjct:  223 GSVFEGIMPKDLNIYVTTASNAQENSWGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSEAHNLKRESVKQQYKSVKQRTSNFNNYAMGSHVMQYGDTNITAEKLYLYQGFDPATVNFPPQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSE 467          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.523e-106
Identity = 178/245 (72.65%), Postives = 213/245 (86.94%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPP-NKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQ 734
            GSIFEG+MPKDL+IYVTTASNAQE+SFGTYCPGM+P PP EY+TCLGDLYSV+WMEDSETHNLKRET+ QQYQ+V++RTSN N+Y  GSHVM+YG+T++ +EKLYLY GFDPA+ NFPP N     +M VVNQRDA+LLFMW MY+ +    EKK+ +L+QITET++HR HLD S+++IGV+L+GP K S +L+SV A GLPLVDDW CLKSMVRVFETHCGSLTQYGMKHMRAF N+CNSGVS+
Sbjct:  203 GSIFEGIMPKDLNIYVTTASNAQENSFGTYCPGMNPPPPEEYVTCLGDLYSVSWMEDSETHNLKRETVQQQYQSVRKRTSNSNSYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNFPPHNGNLEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSK 447          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 8.358e-105
Identity = 176/245 (71.84%), Postives = 211/245 (86.12%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPP-NKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQ 734
            GSIFEG+MPKDL+IYVTTASNAQE+S+GTYCPGM P PPPEYITCLGDLYSVAWMEDSE+HNLK+E++ QQYQ+VK+RTSNF  Y  GSHVM+YG+ ++ +EKLYLY GFDPA+ NFPP N     +M VVNQRDA+LLFMW +Y+ +    EKK+++LKQI E ++HRKHLD S+++IGV+L+GP+K S +L SV   GLPLVDDW CLKSMVRV+ETHCGSLTQYGMKHMRAFANICNSGVS+
Sbjct:  221 GSIFEGIMPKDLNIYVTTASNAQENSWGTYCPGMYPPPPPEYITCLGDLYSVAWMEDSESHNLKKESVEQQYQSVKQRTSNFEAYAMGSHVMQYGDANMTAEKLYLYHGFDPATVNFPPHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSE 465          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.862e-104
Identity = 177/244 (72.54%), Postives = 207/244 (84.84%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQPD-QMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVS 731
            GSIFEG+MPKD+DIYVTTASNAQESS+GTYCPGM+PSPPPE+ TCLGDLYSVAWMEDSE+HNLK+ET+ QQY +VK RTSN+N Y +GSHVM+YGN S+K++KLYL+QGFDPAS NFPPN    +  M VVNQRDA+L FMW +YK +  GSEKK E+L+QI + ++HR HLD+S+ +IG +LFGP K S IL SV   G PLVDDW CLKSMVRVFET CGSLTQYGMKHMR FANICN+GVS
Sbjct:  225 GSIFEGIMPKDVDIYVTTASNAQESSWGTYCPGMEPSPPPEFTTCLGDLYSVAWMEDSESHNLKKETVKQQYSSVKARTSNYNTYAAGSHVMQYGNQSIKADKLYLFQGFDPASVNFPPNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVS 468          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 2.616e-82
Identity = 145/245 (59.18%), Postives = 182/245 (74.29%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFP---PNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGV 728
            GSIFEG++P+ L+IY TTASNA+ESS+GTYCPG +PSPPPEY TCLGDLYSVAWMEDS  HNL+ ET+ QQY+ VK RT+    Y+ GSHVM+YG+  +  + L LY G +PA+ NF     N L+P    V NQRDADL+  W  Y+ A EGS +K+E  KQ+ E M HR H+D S+ ++G ILFG  +G  +LN V + G PLVDDW CLK+ VR FE HCGSL+QYG+KHMR+FANICN+G+
Sbjct:  222 GSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEEPSPPPEYETCLGDLYSVAWMEDSGMHNLQTETLHQQYELVKRRTAPVG-YSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSR-VTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGI 464          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.298e-81
Identity = 143/246 (58.13%), Postives = 181/246 (73.58%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASAN--FPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQ 734
            GSIFEG++P+D+++Y TTASNA ESS+GTYCPG DPSPPPEY TCLGDLYSVAWMEDS+ HNL+ ET+ QQY+ VKERT +   Y  GSHVM+YG+  +  + L+ Y G DPA+ N  F            VNQRDADL+  W  ++ A EGS KK+E  KQ+ E M HR H+D S++++G +LFG +K   +LN+V   G  LVDDW CLK+MVR FETHCGSL+QYGMKHMR+FAN+CN G+ +
Sbjct:  212 GSIFEGLLPEDINVYATTASNADESSWGTYCPGEDPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKERTISGGLYY-GSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKK 456          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.215e-81
Identity = 144/247 (58.30%), Postives = 184/247 (74.49%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFP---PNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQ 734
            GSIFEG++ + L+IY TTASNA+ESS+GTYCPG  P PPPEY TCLGDLYS+AWMEDS+ HNL+ ET+ QQY+ VK RT+++N+Y  GSHVM+YG+  +    L+ Y G +PA+ N+     N L+P    V NQRDADLL  W  Y+ A EG+ +K+E  KQ  E M HR H+D SI +IG +LFG +KG  ILN+V   G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+ ANICN+G+ +
Sbjct:  223 GSIFEGLLLEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAV-NQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGK 466          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.125e-80
Identity = 144/245 (58.78%), Postives = 183/245 (74.69%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFP---PNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGV 728
            GSIFEG++P+ L+IY TTASNA+ESS+GTYCPG DPSPP EY TCLGDLYSVAW+EDSE HNL+ ET+ +QY+ VK+RT+  +  + GSHVME+G+  +  EKL L+ G +PA  NF     N ++P    V NQRDADL+  WH Y+ A EGS +K E  KQ+ E M HR H+D SI +IG++LFG + G  +LN V   G PLVDDW CLKS+VR FE HCGSL+QYG+KHMR+ AN+CN+G+
Sbjct:  207 GSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEDPSPPSEYETCLGDLYSVAWIEDSEKHNLQTETLHEQYELVKKRTAG-SGKSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSR-VTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGI 448          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.292e-78
Identity = 142/248 (57.26%), Postives = 179/248 (72.18%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFP-----PNKLQ-PDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGV 728
            GSIFEG++P DL+IY TTASNA+ESS+G YCPG  P PPPEY TCLGDLYS+AWMEDSE HNL+ E++ QQY+ VK RT +      GSHVMEYG+  +    LY Y G +PA+ N        N L+       VNQRDADL+  W  ++ A EGS +K+E  KQ+ E M HRKH+D S+ +IG +LFG +KG+ +L+ V   G PLVD+W CLK+MV+ FETHCGSL+QYGMKHMR+FANICN+G+
Sbjct:  219 GSIFEGLLPDDLNIYATTASNAEESSWGYYCPGDKPPPPPEYSTCLGDLYSIAWMEDSEVHNLQTESLQQQYKLVKNRTIS---EPYGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGI 463          
The following BLAST results are available for this feature:
BLAST of CX296873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
VPEB_ARATH3.279e-10975.51Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPE_SOYBN8.077e-10873.06Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
LEGU_CANEN1.523e-10672.65Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE2_PHAVU8.358e-10571.84Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_RICCO1.862e-10472.54Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPEG_ARATH2.616e-8259.18Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE1_PHAVU1.298e-8158.13Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_CITSI2.215e-8158.30Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEA_ARATH7.125e-8058.78Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_VICSA2.292e-7857.26Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC05803G06SK FerrChloL1 Citrus clementina cDNA clone C05803G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296873 ID=CX296873; Name=CX296873; organism=Citrus clementina; type=EST; length=739bp
GTGGTAGCATTTTTGAAGGTGTAATGCCCAAAGATCTAGATATATATGTC
ACTACTGCATCAAATGCACAAGAGAGCAGCTTTGGGACTTATTGCCCTGG
AATGGATCCTTCTCCACCTCCAGAGTACATCACTTGCTTGGGGGATTTGT
ACAGTGTTGCTTGGATGGAGGACAGTGAGACTCACAATTTGAAGAGAGAG
ACCATAAGTCAACAGTATCAAGCTGTGAAGGAACGGACTTCCAATTTTAA
CAATTACAATTCTGGATCTCATGTGATGGAATATGGGAACACAAGCGTCA
AATCAGAGAAGCTATACTTGTATCAAGGTTTCGATCCTGCCAGCGCCAAC
TTTCCTCCGAACAAGCTTCAGCCTGATCAAATGGGAGTTGTCAACCAGAG
AGACGCAGATCTTCTCTTCATGTGGCATATGTACAAAAATGCAGCAGAGG
GATCAGAAAAGAAATCAGAAATGCTTAAGCAGATTACAGAGACAATGAGG
CACAGAAAACACTTAGATGCAAGTATTGATATGATTGGAGTAATTTTATT
TGGACCAGATAAGGGTTCTAGAATTCTTAATTCCGTTGGAGCACGTGGCC
TGCCTCTTGTTGATGACTGGCAATGCCTGAAATCAATGGTTCGTGTTTTC
GAGACTCACTGTGGGTCACTCACTCAATATGGCATGAAACACATGAGGGC
ATTTGCCAATATCTGCAACAGTGGTGTGTCCCAGCCTTG
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