CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.100e-52
Identity = 100/174 (57.47%), Postives = 127/174 (72.99%), Query Frame = -1
Query:   82 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPM 591
            + ++KA+ E++  IG+   +EESDI++LPYLQAV+KETFRLH   PL +PRKA +D EI GF V K ++VLVN WAIGRD S WDNP  F PERFLG D+DV+GR++EL PFGAGRRICPG+PLA++ + +ML SL+ SFDWKL              FG+TL K  PL AVP+
Sbjct:  332 KTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.450e-52
Identity = 97/174 (55.75%), Postives = 127/174 (72.99%), Query Frame = -1
Query:   82 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPM 591
            + + KA+ E+++ +G+   ++ESDI+ LPYLQAV+KETFRLHP APL +PRKA +DVE+ GF V K ++VLVN WAIGRD S W+NP  F PERF+G D+DVKGR++EL PFG GRRICPGLPLA++ + +ML SL+ SFDWKL              FGITL +   L A+P+
Sbjct:  332 KTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPV 505          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.199e-52
Identity = 99/174 (56.90%), Postives = 126/174 (72.41%), Query Frame = -1
Query:   82 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPM 591
            E + KA+ E++  IG+   +EESDI+ LPYLQAV+KETFRLHP APL +PRKA +DVE+ GF V K ++V VN WAIGRD + W+N   F PERFLG D+D++GR++EL PFGAGRRICPGLPLA++ + +ML SL+ SFDWKL              FG+TL K  PL AVP+
Sbjct:  333 ETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPV 506          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.755e-50
Identity = 95/174 (54.60%), Postives = 125/174 (71.84%), Query Frame = -1
Query:   76 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVPMAI 585
            +SKA+ ELE+ IG+G  ++E D+ RLPYL  ++KE  RLHP +PL LPRK  T VE++G+T+  G+ V VNAWAIGRD + WD+ L F P+RFL S LDV+G +F+LIPFGAGRRICPG+PLA RM+ IMLGSL+N+FDWK+               G T+ KA+PL  VP+ +
Sbjct:  316 MSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIPL 489          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.486e-49
Identity = 95/173 (54.91%), Postives = 118/173 (68.21%), Query Frame = -1
Query:   85 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVP 591
            +A++K +LE+ Q IG  K  EE DI  LPY+QAVLKE  RLHP  PL +PRKA  D +  G+ + KG++VLVNAWAIGRD   WDNP  F PERFL S +DVKG+N+ELIPFGAGRR+C GLPL  RM+H   GSL++ FDW+L               GIT +K QPL+ +P
Sbjct:  292 QAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48
Identity = 95/174 (54.60%), Postives = 127/174 (72.99%), Query Frame = -1
Query:   82 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPM 591
            E + KA+ E+ Q IG+   ++ESDI  LPYLQA++KET RLHP APL +PRK+ +DV+I GF V K ++V+VN WAIGRD S W+NP+ F PERFL  + DVKGR+FELIPFG+GRR+CPG+ +A++ +H++L SL+ SFDWKL              FG+TL KA+ L AVP+
Sbjct:  334 EKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPL-IPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = -1
Query:   85 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVP 591
            EA++K + E+ Q I   +  E+SDI  LPY+QAVLKE+ RLHP  P  +PR+   D +  G+ V K ++VLVNAWAIGRD   WD+P+ F PERFLGS +DVKG+++ LIPFGAGRR+C GLPL  RM+H  LGSL+  F+W+L               G+T +K   L+ +P
Sbjct:  330 EAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.120e-42
Identity = 88/177 (49.72%), Postives = 112/177 (63.28%), Query Frame = -1
Query:   85 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL----GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVP 591
            + + KA+ EL+  +GR +P+ ESDI +LPYLQAV+KE FRLHP  PL LP  AS   EI G+ + KGS +L N WAI RD   W +PL F PERFL     S +DVKG +FELIPFGAGRRIC GL L +R +  +  +L+  FDW+L              +G+TLQ+A PL   P
Sbjct:  323 DIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHP 499          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.733e-42
Identity = 85/173 (49.13%), Postives = 113/173 (65.32%), Query Frame = -1
Query:   88 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLG---SDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL--XXXXXXXXXKFGITLQKAQPLRAV 591
            + L++A  E++Q IGR + LE+SDI  LPY QA+ KETFR HP  PL LPR ++   E+ GF + K ++++VN WAIGRD   W+NPL F PERFL    + +D +G +FELIPFGAGRRIC G  +    +  +LG+L++SFDWKL            FGI LQK  PL A+
Sbjct:  339 QILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVVEVNMEESFGIALQKKVPLSAI 511          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.490e-41
Identity = 87/171 (50.88%), Postives = 113/171 (66.08%), Query Frame = -1
Query:   88 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL---GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL--XXXXXXXXXKFGITLQKAQPLRAV 585
            L KA+ E++Q IGR + L ESDI  LPYL+A+ KETFR HP  PL LPR ++    + G+ + K +++ VN WAIGRD   W+NPL F PERFL    S +D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL            FG+ LQKA PL A+
Sbjct:  324 LKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C76C1_ARATH1.100e-5257.47Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH2.450e-5255.75Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH3.199e-5256.90Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU1.755e-5054.607-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A1_SOLME1.486e-4954.91Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76C3_ARATH1.258e-4854.60Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76A2_SOLME1.102e-4449.13Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
F3PH_ARATH5.120e-4249.72Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A6_CAMME8.733e-4249.13Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C75A1_PETHY1.490e-4150.88Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
back to top