CX297505

Overview
NameCX297505
Unique NameCX297505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5776 contig Ccv1_Contig5776:1069..1485. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297505 vs. ExPASy Swiss-Prot
Match: ASPG2_ARATH (Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.376e-33
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 1
Query:    1 GEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIW 237
            GEGEAIIRATLARDV+AVMEYKGL LQEAVD+VIK RLDEG AGLIAVS  GEV CGFN+NGMFRGCATEDGFMEV IW
Sbjct:  246 GEGEAIIRATLARDVSAVMEYKGLNLQEAVDYVIKHRLDEGFAGLIAVSNKGEVVCGFNSNGMFRGCATEDGFMEVAIW 324          
BLAST of CX297505 vs. ExPASy Swiss-Prot
Match: ASPG_LUPLU (Isoaspartyl peptidase/L-asparaginase OS=Lupinus luteus PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.306e-25
Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    1 GEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 240
            G+GE IIRAT+ARDVAA+ME+KGL L+EA DFVI ER  +G  GLIAVS  GE+A  FN  GMFR CATEDG+ E+ IWP
Sbjct:  244 GKGEEIIRATVARDVAALMEFKGLSLKEAADFVIHERTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGYSEIAIWP 323          
BLAST of CX297505 vs. ExPASy Swiss-Prot
Match: ASPG_LUPAL (Isoaspartyl peptidase/L-asparaginase OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.544e-24
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    1 GEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 240
            G+GEAIIRAT+ARDVAA+ME+KGL L+EA D V+ ER  +G  GLIAVS  GE+A  FN  GMFR CATEDG+ E+ IWP
Sbjct:  244 GKGEAIIRATVARDVAALMEFKGLSLKEAADCVVHERTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGYSEIAIWP 323          
BLAST of CX297505 vs. ExPASy Swiss-Prot
Match: ASPG_LUPAR (Isoaspartyl peptidase/L-asparaginase (Fragment) OS=Lupinus arboreus PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.866e-24
Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    1 GEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 240
            G+GEAII+AT+ARDVAA+ME+KGL L+EA D+V+ ER  +G  GLIAVS  GE+A  FN  GMFR CATEDG  E+ IWP
Sbjct:  225 GKGEAIIQATVARDVAALMEFKGLSLKEAADYVVHERTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGNSEIAIWP 304          
BLAST of CX297505 vs. ExPASy Swiss-Prot
Match: ASPG_LUPAN (Isoaspartyl peptidase/L-asparaginase OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.911e-23
Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1
Query:    1 GEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 240
            G+GEAII AT+ARDVAA+ME+KGL L+EA D+V+ ER  +G  GLIAVS  GE+A  FN  GMFR  ATEDG+ E+ IWP
Sbjct:  244 GKGEAIISATVARDVAALMEFKGLSLKEAADYVVHERTPKGTVGLIAVSAAGEIAMPFNTTGMFRASATEDGYSEIAIWP 323          
BLAST of CX297505 vs. ExPASy Swiss-Prot
Match: ASPG1_ARATH (Isoaspartyl peptidase/L-asparaginase 1 OS=Arabidopsis thaliana GN=At5g08100 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.887e-22
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query:    1 GEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 240
            G+GE IIR T+ARDVAA+MEYKGL L EA  +V+ + +  G  GL+AVS NGEV   FN  GMFR CA+EDG+ E+ IWP
Sbjct:  234 GKGEDIIRGTVARDVAALMEYKGLSLTEAAAYVVDQSVPRGSCGLVAVSANGEVTMPFNTTGMFRACASEDGYSEIAIWP 313          
The following BLAST results are available for this feature:
BLAST of CX297505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ASPG2_ARATH2.376e-3387.34Probable isoaspartyl peptidase/L-asparaginase 2 OS... [more]
ASPG_LUPLU5.306e-2567.50Isoaspartyl peptidase/L-asparaginase OS=Lupinus lu... [more]
ASPG_LUPAL1.544e-2466.25Isoaspartyl peptidase/L-asparaginase OS=Lupinus al... [more]
ASPG_LUPAR5.866e-2465.00Isoaspartyl peptidase/L-asparaginase (Fragment) OS... [more]
ASPG_LUPAN2.911e-2363.75Isoaspartyl peptidase/L-asparaginase OS=Lupinus an... [more]
ASPG1_ARATH1.887e-2260.00Isoaspartyl peptidase/L-asparaginase 1 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionC06002B12SK RindPdig24 Citrus clementina cDNA clone C06002B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297505 ID=CX297505; Name=CX297505; organism=Citrus clementina; type=EST; length=418bp
GGAGAAGGGGAGGCCATCATACGTGCGACCTTGGCGCGTGATGTGGCGGC
TGTGATGGAGTACAAGGGCTTGTGCCTGCAAGAGGCTGTTGATTTTGTGA
TTAAAGAGAGGCTCGATGAAGGGCAAGCTGGACTCATCGCGGTGTCGAAG
AATGGGGAAGTCGCTTGTGGCTTCAACGCTAATGGAATGTTCAGGGGTTG
TGCTACCGAGGATGGGTTCATGGAAGTTGGCATTTGGCCTTAAATCTTTT
TAACTGTTAGTTAGCTCTGTTAATGCTTTGGTCATGACTCATGTTGGTGC
TGTTGATTGCCGCACCTCGTGTAGTGTTGTTATGTCTAGCGTGTCGTAGA
TTTGGCGCAGTCTTATGATGATGCTTTATTATNAAATAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
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