CX297506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 6.119e-21 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 156 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV Sbjct: 94 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.180e-20 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 156 VFMYFEDNAGVIVN KGEMKGSAITGPIGKECADLWPRIASAANAIV Sbjct: 94 VFMYFEDNAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.969e-19 Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 156 VFMYFEDNAGVIVNPKGEM SAITGPIGKECADLWPRIASAANAIV Sbjct: 93 VFMYFEDNAGVIVNPKGEMNPSAITGPIGKECADLWPRIASAANAIV 139
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 1.411e-17 Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 156 VF+YFEDNAGVI NPKGEMKGSAITGP+GKECADLWPR+AS + +V Sbjct: 91 VFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV 137
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 156 V++YFEDNAGVIVNPKGEMKGSAITGP+ KECADLWPRIAS A +V Sbjct: 93 VYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV 139
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 153 VF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 94 VFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 153 VF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 94 VFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 153 VF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 94 VFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 153 VF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 94 VFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX297506 vs. ExPASy Swiss-Prot
Match: RL23_ICTPU (60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 Query: 16 VFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 153 VF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 94 VFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139 The following BLAST results are available for this feature:
BLAST of CX297506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297506 ID=CX297506; Name=CX297506; organism=Citrus clementina; type=EST; length=411bpback to top |