CX299662

Overview
NameCX299662
Unique NameCX299662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX299662 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.326e-29
Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 2 
Query:   11 AAGYKTAMSHIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPINXXXXXXXXXXTFLYSQAKQ 283
            AAG++ A+S +GP F+WWV AQS+FYHLYNQVSYMSLD+ISPLTFSIGNTMKR          FHTP+QP+N          TFLYSQAKQ
Sbjct:  298 AAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388
[Close]
BLAST of CX299662 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 2 
Query:   17 GYKTAMSHIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPINXXXXXXXXXXTFLYSQAK 280
            G++TA++ +GPQF+WWV AQS+FYHLYNQVSYMSLD+ISPLTFS+GNTMKR          F TPVQP+N          TFLYSQAK
Sbjct:  300 GWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387
The following BLAST results are available for this feature:
BLAST of CX299662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT2_ARATH9.326e-2963.74Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH5.117e-2762.50Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
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Properties
Property NameValue
Genbank descriptionC06024H01SK RindPdig24 Citrus clementina cDNA clone C06024H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299662 ID=CX299662; Name=CX299662; organism=Citrus clementina; type=EST; length=622bp
GGCATTGCGGGCTGCAGGATATAAAACAGCCATGTCTCACATTGGACCGC
AGTTCATATGGTGGGTGGCAGCACAAAGTATTTTCTATCATCTCTACAAT
CAGGTGTCTTACATGTCCTTGGACGAGATCTCTCCCTTGACGTTTAGCAT
TGGAAATACAATGAAACGTATATCTGTCATAGTCTCCTCAATCATAATCT
TCCACACACCTGTCCAACCCATCAACGCTCTTGGAGCTGCAATCGCCATC
CTCGGAACGTTCTTATATTCCCAGGCAAAGCAGTGAGAATGCTTGGGTTG
AACAAGTTAAGATTCATCGTGTAACATAGATGATGAGAGAGCTGTCTTTC
AGGATCCATGCAAGCTGGATTTTGTTCAGATGGACCAGCAGGGGTGTCTT
GCTGTAGATAAAAATAATAAAAATAATAATGGGTGACTATAAGCAACATT
ATACGGGCAGTTAGGCAGTTTTTTGTGTTTTTTTAATATTTAATGAAGTT
GAGGGGGGAAAATTTCCCAACAGACAAGCATTATGTCTAAAGACCTTATC
TGTTTCAAGAGGGAGAAATAACAACGATGCGGACAATGTGATTTCTTTTG
CAAAAAAAAAAAAAAAAAAAAA
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