CX299959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 2 Query: 5 LWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 514 L D RT++QM++TMDRM E+ SG + G S R PW+IKE E+E MRFDMPG++K+DVK+ VE+ +L WS +S Y +R+ LP+N + DKI AE+K+GVL++TIPK +++D+ +Q Sbjct: 85 LLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR------NRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVL--------------------VIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVER-KVIDVQIQ 227
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21 Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 2 Query: 5 LWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 514 L D + R+++QM++TMDR+ E+ G GG R PWEIK+ E+E MRFDMPG++K+DVKV VE+ +L + WS KSY Y +R+ LP+N + +K+ AE+KDGVLY+TIPK ++D+ +Q Sbjct: 92 LLDPWSPMRSMRQMLDTMDRIFEDAITIPGR-------NIGG--GEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDC-------------------WSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIER-TVIDVQIQ 232
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 11 DRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 514 D + R+++Q+++TMDR+ E+ + G GG R PW+IK+ E+E MRFDMPG+ K+DVKV VE+ ML WS+++Y Y +R+ LP+N + DK+ AE+K+GVLY+TIPK +++D+ VQ Sbjct: 41 DPWSPMRSMRQILDTMDRVFEDTMTFPGR-------NIGG--GEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDML-----------------VIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVER-KVIDVQVQ 181
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20 Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 11 DRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINV 511 D RT++QM++TMDR+ E+ + G + S TG RTPW+I + ENE MRFDMPG++K+DVKV VE ML + W ++Y Y +R++LP+NV DKI AE+K+GVL+++IPK + +++D+ + Sbjct: 94 DPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRA---SGTGEI----RTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKH-----------------SW-GRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPK-TEVEKKVIDVQI 234
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = 2 Query: 5 LWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 514 L D RT++QMM+TMDR+ E+ T+P TG R PW+IK+ ENE MRFDMPG++K++VKV VE+ +L + D ++Y Y +R++LP+NV DK+ AE+K+GVL ++IPK ++ D+ ++ Sbjct: 100 LLDPMSPMRTMRQMMDTMDRLFEDTM----TFPGSRNRGTGEI----RAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKD-------------------DSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEK-KVTDVEIK 241
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 5 LWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 514 L D RT++QM++TMDR+ ++ + T SP +R R PW+I E E E MRFDMPG+++++V+V VE+ L + + W +S Y R+ALP+ ++ AE+K+GVL V++PK +++D+ VQ Sbjct: 90 LVDPMSPMRTMRQMLDTMDRLFDDAVGFP-TRRSPAA------RARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGW-------------WKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPK-RETERKVIDVQVQ 238
BLAST of CX299959 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 53/170 (31.18%), Postives = 82/170 (48.24%), Query Frame = 2 Query: 5 LWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXXETQVXXXXXXXXXXXXXXXXDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 514 L D RT++QM++TMDR+ ++ G +P S G R PW++ E + E MRFDMPG+++++VKV VE+ L W +S Y R+ALP+ K+ AE+K+GVL VT+PK + +++D+ VQ Sbjct: 90 LVDPMSPMRTMRQMLDTMDRIFDD--VALGFPATPRRSLATG---EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGW-------------WKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPK-TEVERKVIDVQVQ 240 The following BLAST results are available for this feature:
BLAST of CX299959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299959 ID=CX299959; Name=CX299959; organism=Citrus clementina; type=EST; length=703bpback to top |