CX299973

Overview
NameCX299973
Unique NameCX299973
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length458
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX299973 vs. ExPASy Swiss-Prot
Match: NDUA5_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana GN=At5g52840 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.337e-32
Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 1 
Query:    1 QVEELIEEAQDELTLIGKMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPGPLPEEFHKTLEAVTKKDPTAV-TSSESQSRLKE 252
            QVEELIEEA+DELTLIGKMIEWDPWGVPDDYECEVIENDAP+PKHVP HRPGPLPE+F+KTLE +  +  T +  ++ S  +LKE
Sbjct:   85 QVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVIENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEIPAATPSDPQLKE 169
The following BLAST results are available for this feature:
BLAST of CX299973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDUA5_ARATH3.337e-3274.12Probable NADH dehydrogenase [ubiquinone] 1 alpha s... [more]
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Properties
Property NameValue
Genbank descriptionC07004F03SK SaltLeaf1 Citrus clementina cDNA clone C07004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299973 ID=CX299973; Name=CX299973; organism=Citrus clementina; type=EST; length=458bp
CAGGTCGAGGAGCTCATCGAGGAGGCTCAGGATGAGCTCACGCTCATCGG
GAAAATGATCGAGTGGGATCCTTGGGGTGTTCCTGATGACTACGAATGTG
AAGTTATTGAGAATGATGCTCCGGTTCCCAAGCATGTTCCCCTGCATCGA
CCTGGACCTCTGCCTGAGGAATTCCATAAGACGCTGGAAGCTGTTACCAA
AAAGGATCCTACTGCAGTCACCTCTAGTGAGTCACAATCACGGCTGAAGG
AGTAGTATGCTGCTCCTGTCTGGAAGAATGTTGAGTTTCATAGTCAAAGC
TGTCTCTTTGCCTGCATATTTTCTCTTGTTCTTGCTCTTTATCTTGTATC
TTGCCTGTTTCCTTAGATTGCATAGAGTTTTGATTTATGAGACAAAAGGC
TTGAACCATTGGGTTAATAATATATGAACAGGTGTTACAAGAAAAAAAAA
AAAAAAAA
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