CX299975

Overview
NameCX299975
Unique NameCX299975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length451
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:1022..1471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.933e-45
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGGRPENV AAQ TLL RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  307 FLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 1.637e-44
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE+EATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+ ENVKAAQD LL RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  308 FLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 2.613e-42
Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQD LL RAKANSLAQLGKYT +GE+ EAK+GMFVK Y Y
Sbjct:  297 FLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.873e-40
Identity = 79/92 (85.87%), Postives = 85/92 (92.39%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK +FVKGY+Y
Sbjct:  265 FLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.027e-38
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE EATLNLNAMNQ PNPWHVSFSYARALQN+ L+TW G+PE ++A+Q  LL RAKANSLAQLGKY+ EGE+E+AKKGMFVKGYTY
Sbjct:  300 FLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 3.305e-37
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK    +GY+Y
Sbjct:  259 FLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 1.877e-32
Identity = 73/87 (83.91%), Postives = 74/87 (85.06%), Query Frame = 3
Query:    6 LSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVK 266
            LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTW    ENVK AQD     AK+NSLAQLGKYTGEGESEE KK MFVK
Sbjct:  306 LSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.791e-25
Identity = 59/92 (64.13%), Postives = 66/92 (71.74%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE+E+TLNLNAMNQ PNPWHVSFSYARAL NT LKTW   P  V+A +     R KANS AQ GKY    E +EA +GM+ KG  Y
Sbjct:  282 FLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGPN-PWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQ+E+EAT NLNAMN  PN PW +SFSY RALQ + + TW G   NV+AA+   L RAK NSLAQLGKYTGE  +  A + ++VK Y Y
Sbjct:  265 FLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.337e-24
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGE-SEEAKKGMFVKGYTY 278
            FLSGGQSE EAT+NLNA+NQ  G  PW +SFS+ RALQ + LK W G+ ENVK AQD LLTRAKANS A LG Y G  +  E A + + VK Y Y
Sbjct:  265 FLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
The following BLAST results are available for this feature:
BLAST of CX299975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALFC2_ARATH1.933e-4594.57Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH1.637e-4492.39Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ2.613e-4288.04Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA1.873e-4085.87Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH1.027e-3880.43Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA3.305e-3782.61Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL1.877e-3283.91Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE3.791e-2564.13Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI2.457e-2460.22Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_CICAR9.337e-2461.05Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC07004F05SK SaltLeaf1 Citrus clementina cDNA clone C07004F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299975 ID=CX299975; Name=CX299975; organism=Citrus clementina; type=EST; length=451bp
TGTTCTTGTCTGGTGGGCAATCTGAGGTTGAGGCAACCCTCAACTTGAAC
GCCATGAACCAAGGTCCCAACCCATGGCACGTATCTTTCTCTTATGCCAG
AGCTCTCCAAAACACCTGCCTGAAGACATGGGGTGGCAGGCCAGAGAATG
TCAAGGCAGCTCAGGATACTCTGCTCACCCGTGCCAAGGCCAACTCACTT
GCTCAGCTCGGCAAGTACACTGGCGAGGGAGAATCAGAGGAGGCCAAGAA
AGGAATGTTCGTCAAGGGATACACCTACTAAATTTGTTAGCACGAAGATC
ATAAGAATGGTGAAGAAATTTGAAATGAGTAGTCATCTCAAATGTGTTAA
TGCTTTATAGCCGTGCTTTGGAGACTATTTTTGTTCATGATTACATGTAC
TTTTAGCAACTTAATAAACTTCTTGCCAATGAAAAAAAAAAAAAAAAAAA
A
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