CX299990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299990 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.284e-41 Identity = 84/160 (52.50%), Postives = 108/160 (67.50%), Query Frame = 2 Query: 254 EKWGTHVMGTPAAPTCHPDNKKXXXXXXXXXXDNRAQYNNHHHPYLQYSPVERPS-GSPMESILNVFNSWSNKAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSHQQDQWL-ELCISPCSCGFCSDRP 727 +KWGTHVMG PAAP HPDN++ DN+ + PY+ YSPVE P+ +P+E ++ +F++WS KAET+A N+WHNLKT S+SE AWGK+NLTAKAI GGFE++++Q F T NETLKKTFACYLS + +S FCSDRP Sbjct: 37 KKWGTHVMGAPAAPVAHPDNQQAAAWVAG---DNQ---QTQYQPYVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRP 190
BLAST of CX299990 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 380 HPYLQYSPVERPSGS---PMESILNVFNSW-------SNKAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSHQQDQWL-ELCISPCSCGFCSDRP 727 +PY+ SP E S ME++ V W + K E+LA N W +L+T S ++AA G++ + K GG+E I++QTF T E L +FACYLS + L IS +CSD P Sbjct: 96 NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNP 222
BLAST of CX299990 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 2 Query: 380 HPYLQYSPVERPSGSPMESILNVFNSW-------SNKAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSHQQDQWL-ELCISPCSCGFCSDRP 727 +PY+ SP R + M+S+ + W + KAE LA N W +LKT SV++AA ++ K + GG+E ++KQTF +E L KT+ACYLS L + +S F SD P Sbjct: 65 NPYVSPSPAPR---NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNP 185 The following BLAST results are available for this feature:
BLAST of CX299990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299990 ID=CX299990; Name=CX299990; organism=Citrus clementina; type=EST; length=727bpback to top |