CX299992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 426.402 bits (1095), Expect = 7.787e-119 Identity = 212/244 (86.89%), Postives = 224/244 (91.80%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EESKS+LICNDG+TIQA VVLDATGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFD++KMVFMDWRDSHL NN ELKE NS+IPTFLYAMPFSSNRIFLEETSLVARPG+ M DIQERMVARL HLGIKV+SIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAP+VANAI++ LSS+RS SG LSA VWKDLWPIERRRQREFFCFGMDILL L +FFDAF Sbjct: 195 EESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYLSSERSHSGDELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAF 438
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 421.394 bits (1082), Expect = 2.505e-117 Identity = 207/244 (84.84%), Postives = 224/244 (91.80%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EESKS+LICNDG+TIQA VVLDATGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFD++KMVFMDWRDSHL NN++LKE NS+IPTFLYAMPFSSNRIFLEETSLVARPG+ + DIQERMVARL HLGIKV+SIEEDEHC+IPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAP+VANAI++ L S+RS SG+ LS VWKDLWPIERRRQREFFCFGMDILL L +FFDAF Sbjct: 197 EESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYLGSERSHSGNELSTAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAF 440
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.052e-115 Identity = 205/244 (84.02%), Postives = 221/244 (90.57%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EE KS LIC+DGVTI A VVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFD+DKMVFMDWRDSHLN +EL E N+KIPTFLYAMPFSSNRIFLEETSLVARPG+ M+DIQERMVARL HLGI+++SIEEDE CVIPMGGPLPV+PQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVAN+IV+ L SD +SG+ LSA+VWKDLWPIERRRQREFFCFGMDILL L +FFDAF Sbjct: 200 EEEKSYLICSDGVTIDARVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPMGGPLPVIPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQYLVSDSGLSGNDLSADVWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAF 443
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 4.422e-114 Identity = 201/244 (82.38%), Postives = 216/244 (88.52%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EE+KS+LICNDGVTIQA VVLDATGFSRCLVQYDKPY PGYQVAYGILAEVEEHPFD KMV MDWRDSHL NN ELKE N K+PTFLYAMPFSSN+IFLEETSLVARPG+ M DIQERMVARL HLGIKV+SIEEDEHCVIPMGG LPV+PQRVVG GGTAG+VHPSTGYMVARTLAAAP+VANAI+ L S++ + G+ LSA VWKDLWPIERRRQREFFCFGMDILL L +FFDAF Sbjct: 197 EEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYKPGYQVAYGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFLEETSLVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGSLPVIPQRVVGTGGTAGLVHPSTGYMVARTLAAAPVVANAIIHYLGSEKDLLGNELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAF 440
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 2.054e-111 Identity = 201/246 (81.71%), Postives = 217/246 (88.21%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLS--SDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EE+ S ++C+DGV IQA+VVLDATGFSRCLVQYDKPYNPGYQVAYGI+AEV+ HPFD+DKMVFMDWRD HL++ ELKE NSKIPTFLYAMPFSSNRIFLEETSLVARPG+ M+DIQERM ARLKHLGI V+ IEEDE CVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVR L S S+ G LSAEVW+DLWPIERRRQREFFCFGMDILL L +FFDAF Sbjct: 196 EEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAF 441
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.091e-83 Identity = 145/244 (59.43%), Postives = 189/244 (77.46%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 +E +S ++C+DG I+A++++DA+GF+ V+YDKP N GYQ+A+GILAEVE HPFDLDKMV MDWRDSHL N L+ +N K+PTFLYAMPF SN +FLEETSLV+RP + K+++ RM ARL+H+GI+V+ + EDE C+IPMGGPLPV+PQ V+ IGGT+G++HP+TGYMVART+A AP +A+AI L S R I G L +VW LWPI+RR REF+ FGM+ LL L +FFDAF Sbjct: 200 QEFESSIVCDDGNEIKASLIVDASGFASSFVEYDKPRNHGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGGTSGLIHPATGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAF 443
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 5.455e-80 Identity = 144/244 (59.02%), Postives = 184/244 (75.41%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EE +S ++C+DG I ++++DA+G++ ++YDKP N GYQVA+GILAEV+ HPFDLDKM+ MDWRDSHL N L+ N+K PTFLYAMPF N +FLEETSLV+RP + +++ RMVARL+HLGIKVRS+ E+E CVI MGGPLP +PQ V+ IGGT+G+VHPS+GYMVAR++A AP++A AIV SL S R I G L VW LWP +RRR RE +CFGM+ LL L + FDAF Sbjct: 195 EEFESSIVCDDGRKISGSLIVDASGYASDFIEYDKPRNHGYQVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGSTRMIRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAF 438
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.994e-78 Identity = 141/244 (57.79%), Postives = 182/244 (74.59%), Query Frame = 1 Query: 1 EESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL-TTCH*KFFDAF 729 EE +S ++C+DG I+ ++V+DA+GF+ ++YDKP N GYQ+A+G+L EV+ HPFDLDKMV MDWRDSHL N L+ N+K PTFLYAMPF N +FLEETSLV+RP + +++ RMVARL+HLGIKVRS+ E+E CVIPMGGPLP +PQ V+ IGG +G+VHPSTGYMVAR++A AP++A AIV+ L S R I G L VW LWP++RR E + FGM+ LL L + FDAF Sbjct: 195 EEFESSIVCDDGKKIRGSLVVDASGFASDFIEYDKPRNHGYQIAHGVLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNAKEPTFLYAMPFDRNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGIKVRSVIEEEKCVIPMGGPLPRIPQNVMAIGGNSGIVHPSTGYMVARSMALAPVLAEAIVKGLGSTRMIRGSQLYHRVWNGLWPLDRRCIGECYSFGMETLLKLDLKGTRRLFDAF 438
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYB_SYNE7 (Lycopene beta cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=crtL PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.926e-41 Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 1 Query: 34 GVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRSLSSDRSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNLT 699 G +QA +V+D TG +Q YQ AYGI+ + + P + + V MD+R HL+ E PTFLYAM ++ F+EETSL A P +P +++R+ RL G+ V+ I+ +E+C+ PM PLP L Q VVG GG A MVHP++GYMV L AP +ANAI L++ S++ L+ + W+ LWP E+ R+ + FG++ L+ + Sbjct: 126 GQELQARLVVDTTGHQAAFIQRPHSDAIAYQAAYGIIGQFSQPPIEPHQFVLMDYRSDHLS-----PEERQLPPTFLYAMDLGNDVYFVEETSLAACPAIPYDRLKQRLYQRLATRGVTVQVIQHEEYCLFPMNLPLPDLTQSVVGFGGAASMVHPASGYMVGALLRRAPDLANAIAAGLNASSSLTTAELATQAWRGLWPTEKIRKHYIYQFGLEKLMRFS 342
BLAST of CX299992 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.452e-40 Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 1 Query: 10 KSLLICNDGVTIQAAVVLDATGF-SRCLVQYDKPY-NPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAP----IVANAIVRSLSSD--RSISGHXLSAEVWKDLWPIERRRQREFFCFGMDILLNL 696 +SL+ C V I V A+G S +QY+ Q AYG+ EV+ +PFD MVFMD+RD +L ++++ EA K PTFLYAMP S R+F EET L ++ +P ++++++ RL LG++++ I E+E IP+GG LP Q+ + G A MVHP+TGY V R+L+ AP ++AN + + S + S S +S + W LWP ER+RQR FF FG+ ++L L Sbjct: 221 QSLVECEGDVVIPCRFVTVASGAASGKFLQYELGSPRVSVQTAYGVEVEVDNNPFDPSLMVFMDYRD-YLRHDAQSLEA--KYPTFLYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIPVGGSLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANILRQHYSKNMLTSSSIPSISTQAWNTLWPQERKRQRSFFLFGLALILQL 454 The following BLAST results are available for this feature:
BLAST of CX299992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299992 ID=CX299992; Name=CX299992; organism=Citrus clementina; type=EST; length=736bpback to top |