CX299997

Overview
NameCX299997
Unique NameCX299997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length370
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig812 contig Ccv1_Contig812:233..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX299997 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.704e-15
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 2 
Query:    2 EKVEQSIKSAEEACEGDPASGECAAAWDEVEELSAAASHARERKKD----SDPLEAYCKDNPETDECRTYED 205
            +KV+ ++K AE+AC     S +CA AWD VEELSAA SH ++  K     +DPLEA+CKD P+ DECR YED
Sbjct:   10 KKVQDAVKEAEDAC-AKGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
The following BLAST results are available for this feature:
BLAST of CX299997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE1.704e-1554.17Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
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Properties
Property NameValue
Genbank descriptionC07004H04SK SaltLeaf1 Citrus clementina cDNA clone C07004H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299997 ID=CX299997; Name=CX299997; organism=Citrus clementina; type=EST; length=370bp
AGAGAAGGTGGAGCAAAGCATCAAGAGTGCAGAGGAGGCGTGCGAGGGGG
ACCCTGCTAGTGGCGAGTGTGCTGCTGCATGGGACGAGGTGGAGGAGCTG
AGTGCCGCGGCCAGCCATGCTAGAGAGAGGAAGAAGGATTCCGATCCTTT
GGAGGCTTACTGTAAGGACAACCCAGAGACCGATGAGTGCCGCACTTATG
AAGATTGATAACATCGTCGTTATGCTCTTTTAATTATGTTTTTTTTTTCT
CCTTTTTAAGTCCTTGGATGTTGTTATGTGATGGGATCGTGATGTTTTGG
TCACCTTGATATTCATATACTACAATACCATATGGAGACTTGAATGATAA
AAAAAAAAAAAAAAAAAAAA
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