CX300004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 3.158e-42 Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 2 Query: 164 QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 430 QEEDKKP D AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG Sbjct: 5 QEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.956e-40 Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 2 Query: 167 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGML 436 EEDKKP AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++N+IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG L Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 6.616e-24 Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 152 TNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 430 T ++D KP+ + HINLKV GQD NEVFF+IK++T+ KLM YC RQ +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG Sbjct: 21 TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 50/91 (54.95%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 433 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 50/91 (54.95%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 433 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_CHICK (Small ubiquitin-related modifier 3 OS=Gallus gallus GN=SUMO3 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 433 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINEADTPAQLEMEDEDTIDVFQQQTGGL 93
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_HUMAN (Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 433 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_RAT (Small ubiquitin-related modifier 3 OS=Rattus norvegicus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19 Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 430 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19 Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 430 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CX300004 vs. ExPASy Swiss-Prot
Match: SUMO3_DANRE (Small ubiquitin-related modifier 3 OS=Danio rerio GN=sumo3 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19 Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 161 PQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 430 P+E K ND HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 6 PREGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92 The following BLAST results are available for this feature:
BLAST of CX300004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300004 ID=CX300004; Name=CX300004; organism=Citrus clementina; type=EST; length=540bpback to top |