CX300015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 3.418e-31 Identity = 69/177 (38.98%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSDVDE---------VMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHG----SGLGDYFCSVYVVLCFFPFLRGL-FMTGKKGIPWSTIGKSTALALLFVQWCK 498 +PLALF+ Y Y +EY+ GLS R+WW N+ M RI++ SAW + L+ G SE VFE+T K SD D+ FD P F+P T + ++++ A G R+ A G G+G++ C ++VLCFFPF+RG+ + G GIPWS K++ L +FV +CK Sbjct: 584 VPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVRGIVWGKGSYGIPWSVKLKASLLVAMFVTFCK 760
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.418e-31 Identity = 69/177 (38.98%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSDVDE---------VMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHG----SGLGDYFCSVYVVLCFFPFLRGL-FMTGKKGIPWSTIGKSTALALLFVQWCK 498 +PLALF+ Y Y +EY+ GLS R+WW N+ M RI++ SAW + L+ G SE VFE+T K SD D+ FD P F+P T + ++++ A G R+ A G G+G++ C ++VLCFFPF+RG+ + G GIPWS K++ L +FV +CK Sbjct: 584 VPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVRGIVWGKGSYGIPWSVKLKASLLVAMFVTFCK 760
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.880e-28 Identity = 72/177 (40.68%), Postives = 102/177 (57.63%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSS------------------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 486 I + L I+ LYTL E++ G SI+SW+V RI TT +WLF +++ L+ G S+ VF +T+K + D + FD S +F+PGT I+LV+LAA A L+ LQS+ GSGL + + VV+ F PFL+G+F GK GIP+ST+ K+ LA LFV Sbjct: 573 IIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKKTMPETKSGSGSKKSQREVDCPNQDSGKFEFDGSLYFLPGTFIVLVNLAALAGCLVGLQSRGGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPFSTLSKAAFLAALFV 749
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 1.344e-27 Identity = 67/172 (38.95%), Postives = 95/172 (55.23%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSD----VDEV-----MFDDSPFFVPGTTIILVHLAAWATGLLR----LQSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 486 I LALFL Y Y +EY++ GLS+R+WW N+ M RI++ SAWL L+ G SE VFE+T+K +SD DEV FD SP F+P T + ++++ A G R G G+ ++ +++LC PF+RGL G GIPWS K++ L LF+ Sbjct: 615 ITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRKEKSTSDGNGQNDEVDPERFTFDASPVFIPVTALTMLNIVAITIGTWRAVFGTTEDVPGGPGISEFMSCGWLLLCLLPFVRGLVGKGSYGIPWSVKLKASLLVALFL 786
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 3.911e-27 Identity = 66/176 (37.50%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSDVD---------EVMFDDSPFFVPGTTIILVHLAAWATGLLRL----QSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFVQWCK 498 I LALF+ Y Y +E+I+ G S R+ W N+ M RI + SAWL + L+ GFSE VFE+T+K +SD D FD+S F+P T + ++ + A A G R+ G G+ ++ ++VLCF P LRGL +G+ GIPWS K+ L +F+ +CK Sbjct: 573 IALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRKDKSTSDGDSNTDEPEPGRFTFDESTVFIPVTALAMLSVIAIAVGAWRVVLVTTEGLPGGPGISEFISCGWLVLCFMPLLRGLVGSGRYGIPWSIKMKACLLVAIFLLFCK 748
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.258e-25 Identity = 67/177 (37.85%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSS------------------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 486 I + L ++ LY+L E++ G S++SW+ + RI TT +WLF + + L+ G S+ VF +T+K + D + FD S +F+PGT I+LV+LAA A + LQ GSGL + + VV+ F PFL+G+F GK GIPWST+ K+ LA+LFV Sbjct: 573 IVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFEFDGSLYFLPGTFILLVNLAALAGCSVGLQRHRGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPWSTLSKAAFLAVLFV 749
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 8.155e-25 Identity = 68/174 (39.08%), Postives = 101/174 (58.05%), Query Frame = 1 Query: 40 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK-------IHRSS-----------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAHG---SGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFVQWC 495 LY+L +++ G S++SW+V + RI+ TS+WLF + + L+ G S+ F I +K ++ S ++ + FD S F+PGT I+LV+LAA A L+RLQ S C+HG SGL + + VV+ F PFL+GLF GK IP ST+ K+ L +LFV +C Sbjct: 581 LYSLWQFMSLGFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKSVYESKPSQGEDDVPKLNLGKFEFDSSGLFIPGTFIMLVNLAALAGYLVRLQRSSCSHGGGGSGLAEACGCILVVMLFLPFLKGLFEHGKYSIPLSTLSKAAFLTVLFVFFC 754
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.391e-24 Identity = 73/180 (40.56%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKI--------------HRSSD---VDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAHG---SGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 486 I + L ++ LYTL E++ G SI+SW+V+ RIV TS+WLF + + L+ G S+ VF +++K R D + FD S +F+PGT I+LV+LAA + LQ S +HG SGLG+ + VV+ FFPFL+GLF GK GIP ST+ K+ LA+ FV Sbjct: 572 ITMLLAGMHCLYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKLLGLSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVLVNLAALVGVFVGLQRSSYSHGGGGSGLGEACACILVVMLFFPFLKGLFAKGKYGIPLSTLSKAGFLAVSFV 751
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.099e-24 Identity = 73/181 (40.33%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK------------------IHRSSDVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAH---GSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 486 I + L I+ LYTL E++ G S++SW V+ + RIV TS+WLF + + L+ G SE VF IT+K + +SD+ + FD S F+PGT I+LV++AA A + LQ S +H GSGL + V V++ F PFL GLF GK G P ST+ + LA+LFV Sbjct: 573 ITVTLVGIHCLYTLWEFMSLGYSVQSWLVSQSVWRIVATSSWLFSIFDITLKLLGISETVFIITKKTVAGTKSALGSGPSQGEDVGPNSDLFKFEFDGSLCFLPGTFIVLVNIAALAVFSVGLQRSSYSHEGGGSGLAEACGCVLVMMLFLPFLMGLFKKGKYGTPLSTLSIAGFLAVLFV 753
BLAST of CX300015 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 9.968e-23 Identity = 66/186 (35.48%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 10 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSS--------------------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAHGSGLGDYFCS----VYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFVQW 492 I + L ++ LYTL +++ G S++SW+V+ + RI+ TS+WLF + + L+ G S+ F + +K + ++ + FD S F+PGT I+LV+LAA A L+RLQ S +HG G G +V+ FFPFL+GLF GK GIP ST+ K+ L +LF + Sbjct: 570 IIVTLVGMHCLYTLWQFMILGFSVKSWYVSQSLWRIIATSSWLFSIQDIILKLLGISKIGFIVAKKNMPETRSGYESKSKPSQGEDDGLKLELGKFEFDSSCHFIPGTFIMLVNLAALAGFLVRLQRSSYSHGGGGGSALAETCGCAMIVMLFFPFLKGLFEHGKYGIPLSTLSKAAFLTVLFASY 755 The following BLAST results are available for this feature:
BLAST of CX300015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300015 ID=CX300015; Name=CX300015; organism=Citrus clementina; type=EST; length=546bpback to top |