CX300027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300027 vs. ExPASy Swiss-Prot
Match: RS211_ARATH (40S ribosomal protein S21-1 OS=Arabidopsis thaliana GN=RPS21B PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.163e-22 Identity = 44/55 (80.00%), Postives = 52/55 (94.55%), Query Frame = 2 Query: 2 DHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 166 DHA+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +QQ Sbjct: 28 DHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82
BLAST of CX300027 vs. ExPASy Swiss-Prot
Match: RS212_ARATH (40S ribosomal protein S21-2 OS=Arabidopsis thaliana GN=RPS21C PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 43/55 (78.18%), Postives = 52/55 (94.55%), Query Frame = 2 Query: 2 DHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 166 DHA+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +Q+ Sbjct: 28 DHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQK 82
BLAST of CX300027 vs. ExPASy Swiss-Prot
Match: RS21_ORYSJ (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica GN=RPS21 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.951e-19 Identity = 41/55 (74.55%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 2 DHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 166 DHA+VQINIGHVD +G+Y G+F+TFAL GF+RAQGD DSA+DRLWQK+K EV+QQ Sbjct: 28 DHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82
BLAST of CX300027 vs. ExPASy Swiss-Prot
Match: RS21_MAIZE (40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.675e-19 Identity = 40/54 (74.07%), Postives = 49/54 (90.74%), Query Frame = 2 Query: 2 DHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQ 163 DHA+VQINIGH+DA+G+Y G F+TFAL GFVRAQGD DS++DRLWQKKK E++Q Sbjct: 28 DHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQKKKAEIKQ 81
BLAST of CX300027 vs. ExPASy Swiss-Prot
Match: RS21_CYAPA (40S ribosomal protein S21 OS=Cyanophora paradoxa GN=RPS21 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12 Identity = 31/48 (64.58%), Postives = 41/48 (85.42%), Query Frame = 2 Query: 2 DHAAVQINIGHVDAD-GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 142 DHAAVQIN+GHVD + G+YTG ++TFALCGFVR+ G+ D+A++RL K Sbjct: 28 DHAAVQINVGHVDPNSGLYTGDYTTFALCGFVRSMGESDAALNRLCVK 75
BLAST of CX300027 vs. ExPASy Swiss-Prot
Match: RS21_DICDI (40S ribosomal protein S21 OS=Dictyostelium discoideum GN=rps21 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11 Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 2 Query: 2 DHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKK 145 DHA+VQINIGHV+A+GIY G+ + FA CGF+R G D+A++RL Q+K Sbjct: 25 DHASVQINIGHVNAEGIYNGEQTIFAFCGFLRNNGQSDAALNRLAQQK 72 The following BLAST results are available for this feature:
BLAST of CX300027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300027 ID=CX300027; Name=CX300027; organism=Citrus clementina; type=EST; length=394bpback to top |