CX300048

Overview
NameCX300048
Unique NameCX300048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length348
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300048 vs. ExPASy Swiss-Prot
Match: M2K5_ARATH (Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.912e-19
Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:    1 RQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSXWPAAQLLQHPFILRA 174
            RQGDWASLM AIC +QPPEAP  AS+EFR F+S CLQ DP   W A QLLQHPFIL+A
Sbjct:  271 RQGDWASLMCAICMSQPPEAPATASQEFRHFVSCCLQSDPPKRWSAQQLLQHPFILKA 328
[Close]
BLAST of CX300048 vs. ExPASy Swiss-Prot
Match: M2K4_ARATH (Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana GN=MKK4 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.425e-18
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:    1 RQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSXWPAAQLLQHPFILRAGQSQ 186
            RQGDWASLM AIC +QPPEAP  AS EFR FIS CLQ++P     A QLLQHPFILRA  SQ
Sbjct:  280 RQGDWASLMCAICMSQPPEAPATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQ 341
The following BLAST results are available for this feature:
BLAST of CX300048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
M2K5_ARATH9.912e-1972.41Mitogen-activated protein kinase kinase 5 OS=Arabi... [more]
M2K4_ARATH6.425e-1870.97Mitogen-activated protein kinase kinase 4 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionC07005E02SK SaltLeaf1 Citrus clementina cDNA clone C07005E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300048 ID=CX300048; Name=CX300048; organism=Citrus clementina; type=EST; length=348bp
AGGCAAGGGGATTGGGCGAGTTTGATGTTTGCAATATGTTTCGCCCAGCC
ACCGGAGGCACCTGAAATGGCATCGAGGGAGTTTAGGGATTTTATTTCGC
GTTGTTTGCAAAAAGACCCGCATAGCANGTGGCCGGCTGCGCAGTTGTTG
CAGCATCCGTTTATATTGAGAGCAGGGCAGAGTCAGGTGAATCAGAATCT
CCGGCAAATTTTGCCGCCTCCTCGCCCTCTTAGTTCTTAGATTTTTATGC
TTCTTTTTTTGGAGAAAAATTTGGGATTTTGGTATTTTTGCTGAATATTC
TTGTTTGATATGATGGGATTAATTATGGATTTGATTCTTAGGGGAGGA
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