CX300054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 7.891e-41 Identity = 81/99 (81.82%), Postives = 88/99 (88.89%), Query Frame = 2 Query: 59 MEFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 355 MEFT QL QYNGTD SKPIYVAIKGRVFDVTTGKSFY GG Y+MFAGKDASRAL KMSKN++DV+PSL+GLTEKE+ L+DWE KFEAKYPVVGRVV Sbjct: 1 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.495e-23 Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 62 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRV 352 E T +L QY+G+DP KP+ +AIK +++DVT + FY PGG YA+FAGKDASRALAKMS + D+T + GL E+ L DWE KF +KY VG V Sbjct: 74 EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.420e-23 Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 2 Query: 62 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRV 352 E T +L Y+G+D KP+ +AIKG+++DV+ + FY PGG YA+FAGKDASRALAKMS D D+T + GL E+ L DWE KF +KY VG + Sbjct: 70 EITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 2 Query: 65 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 346 FT +L +Y+G + +PIY+A+KG VFDVT+GK FY G Y AGKD+SR +AKMS + D+T + GLT KE+ L D + K ++AKYP+VG Sbjct: 46 FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVG 140
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 65 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 346 FT +L +Y G + +PIY+A+KG VFDVT+GK FY G Y AGKD+SR +AKMS + D+T GLT KE+ L D + K ++AKYP+VG Sbjct: 46 FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVG 140
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: NENF_HUMAN (Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.226e-18 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 65 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 346 FT +L +Y G + +PIY+A+KG VFDVT+GK FY G Y GKD++R +AKMS + D+T GLT KE+ L + + K ++AKYP+VG Sbjct: 47 FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAKELEALDEVFTKVYKAKYPIVG 141
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.226e-17 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 65 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 346 FT +L +Y G + +PIY+A+KG VFDVT+GK FY G Y GKD++R +AKMS + D+T GLT +E+ L D + + ++AKYP+VG Sbjct: 44 FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVG 138
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: DAP1_YEAST (Damage response protein 1 OS=Saccharomyces cerevisiae GN=DAP1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 20 TNQTRRSSFVHSSMEFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMS------KNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 355 TN + + S + F P L ++NG D K I++AI+G+V+D T G+ FY P G Y FAG DASR LA S K+ D LD LT++++ L +W++ FE KYP +G ++ Sbjct: 29 TNDSNKGSEPVVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGTLI 145
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: DAP1_SCHPO (Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe GN=dap1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.770e-16 Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 62 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDG--------LTEKEMGVLSDWEKKFEAKYPVVGRVV 355 ++TPA+L +YNG+ S +++AIKG V++VT G FY P G Y+ FAG DASR LAK S DD+ P D L ++E L+DW+ F+ KY VGR++ Sbjct: 42 DYTPAELKEYNGSKNSL-VFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS-FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLI 145
BLAST of CX300054 vs. ExPASy Swiss-Prot
Match: PGRC1_PONAB (Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.957e-15 Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 62 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYVPGGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 355 +FTPA+L +++G + I +AI G+VFDVT G+ FY P G Y +FAG+DASR LA + + D L LT + LSDWE +F KY VG+++ Sbjct: 72 DFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLL 171 The following BLAST results are available for this feature:
BLAST of CX300054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300054 ID=CX300054; Name=CX300054; organism=Citrus clementina; type=EST; length=541bpback to top |