CX300057

Overview
NameCX300057
Unique NameCX300057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11803 contig Ccv1_Contig11803:1106..1594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.226e-20
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1
Query:   10 SGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 261
            +G + + DIWS+GCTV+EM T K PWSQ Y+ +AA+F IG +K  P IPD++S +  DF+  CLQ+ P  RPTA +LL HPFV G
Sbjct:  248 TGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDNISSDANDFLLKCLQQEPNLRPTASELLKHPFVTG 332          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.226e-20
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 1
Query:   10 SGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 261
            +G + + DIWS+GCTV+EM T K PWSQ Y+ VAA+F IG +K  P IPD LS + KDF+  CLQ  P  RPTA +LL HPFV G
Sbjct:  249 TGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKDFLLKCLQEVPNLRPTASELLKHPFVMG 333          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 1
Query:   10 SGCNLAVDIWSLGCTVLEMATTKPPWS-QYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 261
            +G + + DIWS+GCTV+EMAT KPPWS QY+  AA+  IG +K  P IP+DLS E KDF+  CL + P  R +A +LL HPFV G
Sbjct:  248 TGHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPEDLSPEAKDFLMKCLHKEPSLRLSATELLQHPFVTG 332          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: BCK1_YEAST (Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19
Identity = 47/84 (55.95%), Postives = 55/84 (65.48%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD----LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 252
            G +  VDIWSLGC VLEM   K PWS  E VAAMFKIG SK  P IP+D    +S  G++F+  C + NP  RPTA +LL HPF
Sbjct: 1356 GYSAKVDIWSLGCIVLEMFAGKRPWSNLEVVAAMFKIGKSKSAPPIPEDTLPLISQIGRNFLDACFEINPEKRPTANELLSHPF 1439          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    1 KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 270
            K+S G     DIWSLGCTVLEM T + P+S  E V A+F+IG    LP +PD LS + + FI  CL+ NP  RPTA +LL+HPFV+   P
Sbjct:  504 KDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRG-TLPEVPDTLSLDARLFILKCLKVNPEERPTAAELLNHPFVRRPLP 592          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 7.436e-18
Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 1
Query:   10 SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL*TL 318
            +G   + DIWSLGC ++EMAT +PPWS    +AA M+ I +S  +P IP  +S E  DF+ LC +R+P  RP A +LL HPF+     L+  I  P +S   TL
Sbjct:  347 TGHGRSSDIWSLGCVIVEMATAQPPWSNITELAAVMYHIASSNSIPNIPSHMSQEAFDFLNLCFKRDPKERPDANQLLKHPFIMN---LDDNIQLPTISPTTTL 447          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1
Query:    1 KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 270
            K+  G     DIWSLGCTVLEM T + P+S  E   A++ IG  K LP IPD LS + +DFI  CL+ NP  RPTA +LL+HPFV    P
Sbjct: 1794 KDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGTGK-LPKIPDILSLDARDFILTCLKVNPEERPTAAELLNHPFVNMPLP 1882          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: YSK4_HUMAN (SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1
Query:    4 NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            N SG     DIWS+GCTV EMAT KPP +  + +AAMF IG  + L P +PD  S+   DF+R+CL R+   RP+A++LL H F++
Sbjct: 1240 NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPDHFSENAADFVRMCLTRDQHERPSALQLLKHSFLE 1325          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K4_HUMAN (Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.392e-16
Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            G   A DIWSLGC V+EM T K PW +YE     M+K+G   + P IP+ LS EGKDF+  CL+ +P  R TA +LLDH FVK
Sbjct: 1520 GHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHK-PPIPERLSPEGKDFLSHCLESDPKMRWTASQLLDHSFVK 1601          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: MKH1_SCHPO (MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe GN=mkh1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL----SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            G +  VD+WSLGC VLEM   + PWS  E + AMFK+G  K+ P IP +L    S E   F+  C   N   RPTA +LL+HPF+K
Sbjct: 1010 GYSAKVDVWSLGCVVLEMLAGRRPWSTDEAIQAMFKLGTEKKAPPIPSELVSQVSPEAIQFLNACFTVNADVRPTAEELLNHPFMK 1095          
The following BLAST results are available for this feature:
BLAST of CX300057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
M3K2_ARATH1.226e-2054.12Mitogen-activated protein kinase kinase kinase 2 O... [more]
ANP1_ARATH1.226e-2057.65Mitogen-activated protein kinase kinase kinase ANP... [more]
M3K3_ARATH1.601e-2055.29Mitogen-activated protein kinase kinase kinase 3 O... [more]
BCK1_YEAST8.784e-1955.95Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS... [more]
M3K1_ARATH2.556e-1852.22Mitogen-activated protein kinase kinase kinase 1 O... [more]
MKKA_DICDI7.436e-1844.23Mitogen-activated protein kinase kinase kinase A O... [more]
WRK19_ARATH1.268e-1752.22Probable WRKY transcription factor 19 OS=Arabidops... [more]
YSK4_HUMAN6.295e-1748.84SPS1/STE20-related protein kinase YSK4 OS=Homo sap... [more]
M3K4_HUMAN2.392e-1653.01Mitogen-activated protein kinase kinase kinase 4 O... [more]
MKH1_SCHPO1.187e-1547.67MAP kinase kinase kinase mkh1 OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionC07005F02SK SaltLeaf1 Citrus clementina cDNA clone C07005F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300057 ID=CX300057; Name=CX300057; organism=Citrus clementina; type=EST; length=489bp
AAGAACTCAAGTGGTTGCAATCTTGCTGTTGATATTTGGAGTCTTGGGTG
CACTGTTTTGGAAATGGCTACAACAAAACCACCTTGGAGCCAGTATGAAG
GGGTTGCTGCTATGTTTAAGATTGGGAATAGTAAGGAACTCCCAACAATT
CCAGATGACCTCTCTGATGAAGGAAAGGATTTTATTAGGTTGTGTTTGCA
ACGTAATCCCTTAAACCGTCCAACAGCAGTTAAGCTTTTGGATCACCCTT
TTGTGAAGGGTGCTGCACCTTTGGAAAGAACTATTTTGGCCCCTGAGCTG
AGTCGTTTGTGAACTCTACTCATCTTATTTTCAAATTCGTTTGGAGATCC
AAACGGAAGCTGTAGATGTTATTACACAACTCGTTTGTGTCGTCGTTTCA
TGTTTTGAAAATTTGAAAATAAGATGAGTAGTGTTCACGACAGCGTCGAG
ACCGTTTACGCCGCTGCAACTGCCATAGTTTCAGCTGAG
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