CX300060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.078e-21 Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+GVRSLN AA+TT DRQAACNCLK A+ +I+G+ N+AAGLP +CGV +PYKISPSTDC V+ Sbjct: 28 CNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.347e-20 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 CSGV+SLN AA+TTPDRQAAC CLK AY +I G+ AA P +CGV IPYKISPSTDCS+V+ Sbjct: 53 CSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.489e-19 Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+G+R++NG ARTT DRQ ACNCLK G+I G+ PN AAGLP +CGV +PYKIS ST+C+ V+ Sbjct: 52 CNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.540e-19 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+G+R++N ARTTPDRQAACNCLK+ ++ G+ PN AA LP +CGV IPY+ISPST+C+ V+ Sbjct: 54 CNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.659e-19 Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 CSGVRSLN AARTT DR+AACNCLK A IRG+ AA +PS+CGV IPY IS STDCSRV Sbjct: 59 CSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.652e-19 Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+G+R++N ARTTPDRQAACNCLK+ ++ G+ PN AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 28 CNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.652e-19 Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+G+R++N ARTTPDR+ ACNCLK+ G+I G+ PN AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 28 CNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.150e-18 Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 CSGVRSLN AARTT DR+AACNCLK A + G+ AA +PS+CGV IPY IS STDCSRV Sbjct: 57 CSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.808e-18 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C GV++L +ARTT DRQ AC CLK A G I GI AAGLPS CGV IPYKISPSTDCS+V+ Sbjct: 51 CGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.668e-18 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+G++++NG A+TTPDRQAACNCLK G++ G+ P A LP +CGV +PYKIS ST+C+ V+ Sbjct: 52 CNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115 The following BLAST results are available for this feature:
BLAST of CX300060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300060 ID=CX300060; Name=CX300060; organism=Citrus clementina; type=EST; length=422bpback to top |