CX300062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCAP_ARATH (Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 1.458e-47 Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 2 Query: 176 EELKPAILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 E LKPAI L+ENALKHL+KMRSER EDLCLRIGVKQGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFGMQLDYSDALIGGGFSF NPNA Sbjct: 66 EGLKPAISLSENALKHLSKMRSERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSNPNA 166
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: Y1417_SYNY3 (Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803) GN=slr1417 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.211e-29 Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 2 Query: 194 ILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 I L++ ALKHL ++ ++ +DLCLR+GV+QGGCSGMSY M+FE A D V +Y+GF I+CD KSLL+L+G+ LDYS+ALIGGGF F NPNA Sbjct: 12 IQLSDAALKHLLALKEQQGKDLCLRVGVRQGGCSGMSYMMDFEEPNRATEHDEVFDYEGFQIICDRKSLLYLYGLMLDYSNALIGGGFQFTNPNA 106
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: YCF83_PORPU (Uncharacterized protein ycf83 OS=Porphyra purpurea GN=ycf83 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 4.878e-27 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 176 EELKPAILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 EE I LTE A + + ++S ++CLRIGVKQGGCSGMSY+M FE+ ++ R D V+ D F++ CDPKSLL+L+G+ LDYS LIGGGF F NPNA Sbjct: 2 EENMNFITLTEPAARQIKILKSNFDNEVCLRIGVKQGGCSGMSYSMNFESVSSLRETDEVLMLDSFLVACDPKSLLYLYGLSLDYSSELIGGGFQFSNPNA 102
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: YCF83_GALSU (Uncharacterized protein ycf83 OS=Galdieria sulphuraria GN=ycf83 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.787e-25 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 194 ILLTENALKHLNKMRSERSED-LCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 I +T++AL HLN + SED L +RIG+KQGGCSG+SY M +E ++N +D V +YD F +VCD KS+L+L+G+ LDYS +LI GGF F NPNA Sbjct: 6 INITKSALDHLNSISKLNSEDKLYIRIGIKQGGCSGLSYFMTYEKKSNISDNDLVYDYDNFTLVCDNKSILYLYGISLDYSSSLIDGGFKFLNPNA 101
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: YCF83_PORYE (Uncharacterized protein ycf83 OS=Porphyra yezoensis GN=ycf83 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.048e-24 Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 194 ILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 I +T+ ALK + ++++ D+ LRIGV+QGGCSGMSY+M FE+ + D + D F +VCDPKSLL+L+G+ LD+S LIGGGF F NPNA Sbjct: 8 ITITKPALKQIAILKNDHENDVHLRIGVRQGGCSGMSYSMNFEHVDKLKDTDERLRLDNFSVVCDPKSLLYLYGLSLDFSSELIGGGFQFSNPNA 102
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_METFK (Putative iron-sulfur cluster insertion protein erpA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=erpA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.127e-15 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 173 TEELKPAILLTENALKHLNKMRSER-SEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 TEE+ ++ T+NA + + ++ E S DL LR+ V GGCSG Y FE N DD+ ++ DG ++ DP SL +L G ++DY D+L G F +NPNA Sbjct: 5 TEEIPSPLIFTDNAARKVKELIDEEGSPDLKLRVFVSGGGCSGFQYGFTFEETINE--DDTTVDKDGVTLLIDPMSLQYLVGAEIDYQDSLQGSQFVIRNPNA 105
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_XYLFM (Iron--sulfur cluster insertion protein erpA OS=Xylella fastidiosa (strain M12) GN=erpA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 212 ALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 A K ++ E S DL LR+ ++ GGCSG Y EF ENRA+ DD V+E DG V++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 30 AAKVRELIQEENSADLALRVYIQGGGCSGFQYGFEFDENRAD---DDLVLETDGVVLLVDPLSLQYLLGAEVDYTESLTGAKFVIRNPNA 116
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA1_METCA (Iron-sulfur cluster insertion protein erpA 1 OS=Methylococcus capsulatus GN=erpA1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 185 KPAILLTENALKHLNKMRSERSED-LCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 +PA++ T NA ++++ +E L LR+ V GGCSGM Y FE N DD+ +E DG V++ DP SL +L G ++DY + L G F KNPNA Sbjct: 11 EPALIFTGNAAAKVSELIAEEGNPALKLRVYVSGGGCSGMQYGFAFEEAVNE--DDTTVEKDGVVLLVDPTSLQYLQGAEIDYQEGLEGSRFVIKNPNA 107
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: YUTM_BACSU (Uncharacterized protein yutM OS=Bacillus subtilis GN=yutM PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.246e-14 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 2 Query: 194 ILLTENALKHLNKMRSERSEDLC-LRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 + +TE A H+ M E E+ LR+GVK GGCSG+SY M FE+ + DSV + G ++ D +SL + G +DY +++GGGF+ NPNA Sbjct: 5 VTITEAAALHIKDMMKEHEEENAFLRVGVKGGGCSGLSYGMGFEHEKSE--SDSVFDQHGITVLVDKESLDIMNGTVIDYKQSMLGGGFTIDNPNA 98
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_HAEIN (Iron-binding protein iscA OS=Haemophilus influenzae GN=iscA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.626e-14 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 194 ILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 I LTE A + + R + + LR+GVK GCSG++Y +EF + N+ +D V E G I+ DPKSL++L G++LDY + GF + NPN Sbjct: 3 ITLTEKAAQRVKAFLDNRGKGIGLRLGVKTSGCSGLAYVLEFVDVLNS--EDQVFEQYGVNIIVDPKSLVYLNGIELDYVKEGLNEGFKYNNPN 94 The following BLAST results are available for this feature:
BLAST of CX300062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300062 ID=CX300062; Name=CX300062; organism=Citrus clementina; type=EST; length=479bpback to top |