CX300085

Overview
NameCX300085
Unique NameCX300085
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.975e-56
Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1
Query:    1 EIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450
            E+M+ TI+ECE   + GE+KYCATSLESM+DFS SKLGK  V+A+STEV KK   MQ Y IAA GVK+++ DKSVVCHKQ YP+AVFYCH    T  Y VPLEG +G +AKA AVCH +TSAWNP HLAF+VLKVKPGTVP+CHFLPE H+VW
Sbjct:  237 EMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.189e-47
Identity = 93/154 (60.39%), Postives = 115/154 (74.68%), Query Frame = 1
Query:    7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEV-KKGTKMQTYTIAAGVKQMAA----DKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450
            M  T+++CE P  +GE+K CATSLESM+DF+TS LG S V+A ST V K+G+  Q YT+ A VK+ AA    D+ V CH + Y YAVF CH T+ TRAY V + G DGT  +A AVCH DT+ WNPKH+AFQVLKVKPGTVP+CHFLP+DH+VW
Sbjct:  273 MAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTA-VKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 3.616e-42
Identity = 82/153 (53.59%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    4 IMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV--KKG-TKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450
            +++NT+ ECE P  KGE+K CATSLESM+DF  S LG + ++A ST +  K G T  Q YT+    +     + + CH ++YPYAVF CH T+ TRAY   L G DG   +A AVCHTDT+ WNPKH AFQVL VKPGTVP+CHF+  D +VW
Sbjct:  168 VVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.984e-40
Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 1
Query:    7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAIST-----EVKKGTKMQTYTIAAGVKQMAADKSVV-CHKQNYPYAVFYCHATQ-TTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450
            M  T+++CE P  KGE+K CATSLES++DF TS  G S V A ST      V+  +  Q YT++ GV++MA    ++ CH ++YPYAVF CH T+ TTRAY   L G DGT  +A AVCHTDTS WNP+H AF VL VKPGTVP+CHF+  D +VW
Sbjct:  427 MSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVS-GVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.058e-36
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:    7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKK 465
            M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ A          V CH + YPY V+ CH T  +RAY V +EGA G  A   AAVCHTDTS WNP+H++F++L  KPG  P+CH +P  HI+W  N K
Sbjct:  203 MEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKNVK 358          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.282e-35
Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 1
Query:    7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459
            M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ +          V CH + YPY V+ CH T  +RAYMV +EGA G  A   A VCHTDTS WNP+H++F++L  KPG  P+CH +P  HI+W  N
Sbjct:  230 MEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKN 383          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.008e-33
Identity = 71/160 (44.38%), Postives = 101/160 (63.12%), Query Frame = 1
Query:    7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEG---ADGTKA-KAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKT 468
            M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST  + G  +Q Y + A V  +     V CH Q YPY V+ CH T   RAYMV +EG    DG +A   A VCHT+TS WNP+H++F++L  KPG  P+CH +P  HIVW  N K+
Sbjct:  251 MRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVKS 409          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.899e-31
Identity = 75/157 (47.77%), Postives = 98/157 (62.42%), Query Frame = 1
Query:    1 EIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG--TKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459
            + M++T+ ECE     GE K CATSLESM++F+ S LG + V A+STEV +   T  Q Y + A     ++    V CH   Y YAVF CH T T  AY V L GADGTKA+A A CHTD +    +  A++ L V PG+VP+CHFLP+D ++WV N
Sbjct:   86 DAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHTT-TAAAYTVTLAGADGTKAEALAACHTDAAPRVAE--AYKRLGVAPGSVPVCHFLPQDDMLWVRN 239          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: EA92_VICFA (Embryonic abundant protein USP92 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 1
Query:   28 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V PGTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRETTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259          
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: EA30_VICFA (Embryonic abundant protein VF30.1 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 1
Query:   28 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V PGTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259          
The following BLAST results are available for this feature:
BLAST of CX300085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
RD22_ARATH1.975e-5668.63Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ2.189e-4760.39BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP5_ORYSJ3.616e-4253.59BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ1.984e-4054.49BURP domain-containing protein 17 OS=Oryza sativa ... [more]
RAF1B_WHEAT5.058e-3645.51Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
RAF1A_WHEAT4.282e-3544.81Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURPD_ORYSJ4.008e-3344.38BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP6_ORYSJ4.899e-3147.77BURP domain-containing protein 6 OS=Oryza sativa s... [more]
EA92_VICFA1.803e-2542.07Embryonic abundant protein USP92 OS=Vicia faba PE=... [more]
EA30_VICFA1.803e-2542.07Embryonic abundant protein VF30.1 OS=Vicia faba PE... [more]

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Properties
Property NameValue
Genbank descriptionC07005H06SK SaltLeaf1 Citrus clementina cDNA clone C07005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300085 ID=CX300085; Name=CX300085; organism=Citrus clementina; type=EST; length=506bp
GAAATAATGCAGAACACAATCAAAGAGTGTGAAGACCCTGGCATTAAAGG
AGAGCAGAAATATTGTGCAACTTCACTGGAGTCAATGATTGACTTCAGCA
CTTCTAAGCTTGGAAAGAGTGTTCAGGCAATTTCTACGGAGGTAAAAAAA
GGAACCAAGATGCAGACATATACAATCGCAGCTGGAGTGAAGCAGATGGC
AGCTGACAAATCAGTAGTGTGCCATAAGCAGAACTATCCATATGCTGTAT
TCTACTGCCATGCAACACAAACCACAAGGGCTTACATGGTTCCCTTGGAA
GGTGCTGATGGGACAAAAGCCAAAGCAGCAGCAGTCTGCCACACAGATAC
ATCAGCATGGAACCCCAAGCATTTAGCTTTTCAAGTGCTCAAAGTTAAGC
CAGGAACTGTTCCTATATGTCACTTCCTTCCTGAGGATCACATTGTCTGG
GTTCCCAATAAGAAGACTGGAGAATAGAATTTGATCCTCTTATCCCATCT
ACTTAA
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