CX300092

Overview
NameCX300092
Unique NameCX300092
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length373
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300092 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.329e-22
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 3 
Query:    3 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 149
            EIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK
Sbjct:  222 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
[Close]
BLAST of CX300092 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.329e-22
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 3 
Query:    3 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 149
            EIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK
Sbjct:  222 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
The following BLAST results are available for this feature:
BLAST of CX300092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CB12_SOLLC9.329e-2293.88Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB12_PETHY9.329e-2293.88Chlorophyll a-b binding protein, chloroplastic OS=... [more]
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Properties
Property NameValue
Genbank descriptionC07006A02SK SaltLeaf1 Citrus clementina cDNA clone C07006A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300092 ID=CX300092; Name=CX300092; organism=Citrus clementina; type=EST; length=373bp
AGGAGATCAAGAATGGAAGATTGGCTATGTTGGCTGTGATGGGTGCTTGG
TTCCAGCACATTTACACCGGCACCGGCCCCATTGACAATCTCATTGCCCA
CCTTGCTGATCCTGGTCATGCCACCGTTTTTGCTGCCTTCACCCCCAAGT
GAGATGATGACGAGCAAAGGGAGAGAAATTTGGGCCAAGAGGAAGCTTGA
GATCAAAGGAATTGGTGTTTCTCTTAGGGAAAGGTTGTATGATTAGAACT
TGTATTAATTGCCTCTATCTATGTACAAAGACTTGTGTGATCACTTAGAT
GCCATGAATATAAAAAATATTCAGGTGGAAAAGAAAAAAAAAAACAAAAA
AAAAACCTCGGGGGGGGCCCGGT
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