CX300097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 2.463e-43 Identity = 79/98 (80.61%), Postives = 89/98 (90.82%), Query Frame = 1 Query: 208 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 +L AREAVNEVQVV DSSW+ LVI SE PVLV+FWAPWCGPCRMIAP I+ELAKEYAGK+ C+KLNTD+SPN ATKYGIRSIPTVLFFKNGE+K+S+ Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSV 155
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 3.328e-40 Identity = 85/168 (50.60%), Postives = 111/168 (66.07%), Query Frame = 1 Query: 10 MAMKNCFQVSSVYSTRAGVVQCY----QPFSSVKKIHLPISNGLNKXXXXXXXXXXXXXXXXXXXXXXXXILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 MA++NC Q+S+ S V+ + QP S K+++P GL + ++CKA EAV EVQ V DSSW+ V+ SE PV+V+FWAPWCGPC++IAP I+ELAKEY+GK+A +KLNTD++P IAT+Y IRSIPTVLFFKNGE+KESI Sbjct: 1 MAIENCLQLSTSASVGTVAVKSHVHHLQPSS---KVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS---VVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESI 162
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.019e-37 Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 1 Query: 214 CKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 C+ V+EV V + +W+++V+ SE PVLVEFWAPWCGPCRMIAP I+ELAKEY GK+ C K+NTDDSPNIAT YGIRSIPTVL FKNGEKKES+ Sbjct: 58 CQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESV 153
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.498e-37 Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 1 Query: 211 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 +C+++ AV+EV V + +W+ LV++ E PVLVEFWAPWCGPCRMIAP I+ELAK+YAGK+ C K+NTDDSPN+A+ YGIRSIPTVL FK GEKKES+ Sbjct: 51 VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESV 147
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 7.673e-37 Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 1 Query: 211 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 +CK + V+EV V + +W+N+VI+ E+PVLVEFWAPWCGPCRMIAP I+ELAK+Y GK+ C K+NTDD PNIA+ YGIRSIPTVL FK+GEKKES+ Sbjct: 60 VCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESV 156
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31 Identity = 54/98 (55.10%), Postives = 77/98 (78.57%), Query Frame = 1 Query: 208 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 I+C+A++ + +V DS+WE+LV+ ++ PV+V+FWAPWCGPC+MI P + ELA++Y GK+ FKLNTDDSP KYG+RSIPT++ F GEKK++I Sbjct: 62 IICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTI 159
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31 Identity = 52/98 (53.06%), Postives = 78/98 (79.59%), Query Frame = 1 Query: 208 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 ++C+A+E ++QVV DS+W++LV+ + PV+V+FWAPWCGPC+MI P + +LA+ Y GK+ +KLNTD+SPN +YG+RSIPT++ F GEKK++I Sbjct: 71 VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTI 168
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.073e-30 Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 208 ILCKARE---AVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 I C+A++ A EV ++DS W+ V+ S+ PVLVEFWAPWCGPCRMI P +++LAK++AGK +K+NTD+SPN A +YGIRS+PTV+ FK GEKK+SI Sbjct: 74 IACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSI 174
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.187e-29 Identity = 51/98 (52.04%), Postives = 77/98 (78.57%), Query Frame = 1 Query: 208 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 ++C+A++ + VV DS+W++LV+ ++ PV V+FWAPWCGPC+MI P + ELA++YAG+ +KLNTD+SP +YG+RSIPT++ F NGEKK++I Sbjct: 65 VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTI 162
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 4.985e-28 Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 238 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 E V D +++N+V+ S PVLV+FWAPWCGPCR+IAP ++E+A EY K+ C KLNTD+SPN+A++YGIRSIPT++ FK G+K E+I Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETI 122 The following BLAST results are available for this feature:
BLAST of CX300097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300097 ID=CX300097; Name=CX300097; organism=Citrus clementina; type=EST; length=502bpback to top |