CX300104

Overview
NameCX300104
Unique NameCX300104
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15160 contig Ccv1_Contig15160:628..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 9.090e-86
Identity = 156/165 (94.55%), Postives = 160/165 (96.97%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLES 505
            GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSE  FYL WAVHSFRITN GVQDTTQ+HTHMCYSNFNDIIHSI++MDADVITIENSRSDEKLLSVFREGVKY AGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE+
Sbjct:  559 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET 723
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 7.695e-85
Identity = 154/165 (93.33%), Postives = 158/165 (95.76%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLES 505
            GPVTILNWSFVRNDQPR ETCYQIALAIK+EVEDLEKAGI VIQIDEAALREGLPLRKSE DFYLKWAVHSFRITN GVQDTTQ+HTHMCYSNFNDIIHSI+DMDADVITIENSRSDEKLLSVFREGVKY AGIGPGVYDIHSPRIP TEE+ADRI KMLAVLES
Sbjct:  560 GPVTILNWSFVRNDQPRHETCYQIALAIKNEVEDLEKAGINVIQIDEAALREGLPLRKSEHDFYLKWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEELADRIRKMLAVLES 724
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 9.407e-83
Identity = 150/165 (90.91%), Postives = 157/165 (95.15%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLES 505
            GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGI VIQIDEAALREGLPLRK+E  FYL WAVHSFRITN  +QDTTQ+HTHMCYSNFNDIIHSI+DMDADV+TIENSRS EKLLSVFREGVKY AGIGPGVYDIHSPRIPSTEEIADRINKMLAVL++
Sbjct:  560 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNLPLQDTTQIHTHMCYSNFNDIIHSIIDMDADVMTIENSRSSEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLDT 724
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.605e-82
Identity = 150/164 (91.46%), Postives = 156/164 (95.12%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPLRKSE  FYL WAVHSFRITN GVQD+TQ+HTHMCYS+FNDIIHSI+DMDADVITIENSRSDEKLLSVFREGVKY AGIGPGVYDIHSPRIPS+EEIADR+NKMLAVLE
Sbjct:  560 GPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLE 723
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.701e-58
Identity = 113/158 (71.52%), Postives = 127/158 (80.38%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINK 484
            GPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  KY   IGPGVYDIHSP IP+ E I   + K
Sbjct:  563 GPVTILNWSFVRDDQPRSVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DNFKYPNEIGPGVYDIHSPNIPTQEHIVGLMKK 719
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.047e-57
Identity = 112/158 (70.89%), Postives = 127/158 (80.38%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINK 484
            GPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLE+AG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  KY   IGPGVYDIHSP IP+ + I   + K
Sbjct:  563 GPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEQAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DDFKYPNEIGPGVYDIHSPNIPTQDHIVGLMRK 719
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.368e-57
Identity = 112/158 (70.89%), Postives = 127/158 (80.38%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINK 484
            GPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  KY   IGPGVYDIHSP IP+ + I   + K
Sbjct:  563 GPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DTFKYPNEIGPGVYDIHSPNIPTQDHIVGLMKK 719
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=metE PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.368e-57
Identity = 112/158 (70.89%), Postives = 127/158 (80.38%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINK 484
            GPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  KY   IGPGVYDIHSP IP+ + I   + K
Sbjct:  563 GPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DTFKYPNEIGPGVYDIHSPNIPTQDHIVGLMRK 719
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=metE PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.368e-57
Identity = 112/158 (70.89%), Postives = 127/158 (80.38%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINK 484
            GPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  KY   IGPGVYDIHSP IP+ + I   + K
Sbjct:  563 GPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DTFKYPNEIGPGVYDIHSPNIPTQDHIVGLMKK 719
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.786e-57
Identity = 111/158 (70.25%), Postives = 127/158 (80.38%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINK 484
            GPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV +FRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  +Y   IGPGVYDIHSP IP+ + I   + K
Sbjct:  563 GPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DSFRYPNEIGPGVYDIHSPNIPTQDHIVGLMKK 719
The following BLAST results are available for this feature:
BLAST of CX300104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
METE_SOLSC9.090e-8694.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR7.695e-8593.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO9.407e-8390.915-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH1.605e-8291.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS34.701e-5871.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ1.047e-5770.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH1.368e-5770.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCC1.368e-5770.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCA1.368e-5770.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM1.786e-5770.255-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC07006B05SK SaltLeaf1 Citrus clementina cDNA clone C07006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300104 ID=CX300104; Name=CX300104; organism=Citrus clementina; type=EST; length=507bp
GCACGAGGCTGGCCCTGTCACCATTTTGAACTGGTCATTTGTTCGAAATG
ATCAGCCCAGATTCGAGACCTGCTATCAGATTGCATTGGCAATCAAGGAT
GAAGTTGAGGATCTTGAGAAAGCTGGTATCACTGTCATCCAGATTGATGA
GGCTGCTTTACGAGAGGGATTACCACTCAGGAAGTCTGAGCAGGACTTTT
ATCTGAAATGGGCTGTGCACTCCTTTAGGATTACTAACTGAGGTGTTCAA
GACACTACCCAGGTCCATACCCACATGTGCTATTCAAACTTCAACGATAT
CATCCACTCAATTATGGACATGGACGCAGATGTGATCACTATTGAGAACT
CTAGATCCGATGAAAAGCTTCTCTCAGTCTTCCGTGAGGGAGTGAAGTAT
CGCGCTGGCATTGGTCCCGGTGTGTACGACATCCACTCTCCGAGGATCCC
ATCGACAGAAGAAATTGCCGATCGCATCAACAAGATGCTTGCAGTTCTTG
AGAGCAA
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