CX300109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCC11_ARATH (Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYCC1-1 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 4.476e-40 Identity = 75/102 (73.53%), Postives = 91/102 (89.22%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEERINAAFGKLALK 307 L +FLQDA +ND+NM ++WGI+NDTYKMDLILVHPP+ IALACIYIASV+REKD TAWFE+L DMN+VKNI+MEILDFYEN R ++EE++N+AF KLALK Sbjct: 151 LSEFLQDAALNDVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTITEEKVNSAFSKLALK 252
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCC12_ARATH (Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.789e-39 Identity = 73/100 (73.00%), Postives = 89/100 (89.00%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEERINAAFGKLA 301 L +FLQD+G+ND +MTHL+WG++NDTY+MDLIL+HPP LI LACIYIASV++EKD WFEEL VDMN+VKNI+MEILDFYEN RL +EER++AAF KLA Sbjct: 151 LPEFLQDSGINDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEERVHAAFNKLA 250
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCC11_ORYSJ (Cyclin-C1-1 OS=Oryza sativa subsp. japonica GN=Os09g0504400 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31 Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYEN-----QRLVSEERINAAFGKLALK 307 L+Q LQDAG+ D+ T +WGI+NDTYKMDLIL+HPP++IALACIYIASV ++KD T WFEELRVDMN+VKNISMEILDFY+ QR + E++I KL K Sbjct: 152 LLQLLQDAGITDL--TQFAWGIVNDTYKMDLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQRGLPEDKIAPVMNKLPSK 256
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_RAT (Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 154 LLQYVQDMGQEDV-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 243
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_MOUSE (Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 159 LLQYVQDMGQEDV-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_XENTR (Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 159 LLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_XENLA (Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 159 LLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_HUMAN (Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 159 LLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_CHICK (Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 159 LLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CX300109 vs. ExPASy Swiss-Prot
Match: CCNC_BOVIN (Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 LVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 274 L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 159 LLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248 The following BLAST results are available for this feature:
BLAST of CX300109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300109 ID=CX300109; Name=CX300109; organism=Citrus clementina; type=EST; length=571bpback to top |