CX300126

Overview
NameCX300126
Unique NameCX300126
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300126 vs. ExPASy Swiss-Prot
Match: FLUG_EMENI (Protein fluG OS=Emericella nidulans GN=fluG PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = 2 
Query:   11 WGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRRLCLPEPIDANP---ASLD-------GKLQRLPTSLSESVQALEKDDILRDMIGEKLLIAIKGIRKAEINYYSL--NKDAYKQLIHRY 397
            WG +NREAP+R   P         ++E+KS DG AN +L +AA +A+G  G++   LP  I   P   ASL        G   +LP +L++S+ ALE D+ILR ++GE L+     +++AE    S    K   K L+ RY
Sbjct:  734 WGTQNREAPIRKISP--------GHWEIKSLDGLANMYLAMAAFLAAGYTGVKEN-LPLTIKDCPYDAASLPESERAALGITTKLPNTLAKSLAALESDEILRSLLGENLVEDYIIVKRAESKKLSAMDEKARRKWLVERY 865
The following BLAST results are available for this feature:
BLAST of CX300126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FLUG_EMENI2.478e-1236.88Protein fluG OS=Emericella nidulans GN=fluG PE=1 S... [more]
back to top
Properties
Property NameValue
Genbank descriptionC07006E03SK SaltLeaf1 Citrus clementina cDNA clone C07006E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300126 ID=CX300126; Name=CX300126; organism=Citrus clementina; type=EST; length=593bp
ATACCAATGCTGGGGAAAAGAAAATAGGGAAGCTCCATTAAGGACTGCAT
GCCCGCCAGGGGTCAAGGATGGTGTAGTGAGCAACTTTGAATTAAAATCA
TTTGATGGCTGTGCCAATCCACACTTGGGCTTGGCTGCAATAATTGCCAG
TGGCATTGATGGACTTCGGAGGCTTTGTCTTCCTGAACCCATAGATGCAA
ACCCCGCCAGTCTCGATGGGAAACTTCAAAGATTGCCTACATCACTCTCT
GAGTCTGTACAAGCTTTGGAAAAAGATGATATCCTGCGAGATATGATTGG
TGAAAAGCTTTTGATTGCCATAAAAGGAATTCGCAAGGCTGAAATCAACT
ATTACTCACTAAATAAGGACGCGTACAAGCAACTTATACACCGCTACTAA
GCTATAATTTTCCGCTGGTAGGATTCTGAGAATCCTTTGCGCTAAATTAT
GGGAAGGCTCATTTTGTTTCTATTAGGTCTTGCAAAAGTTGTTTTTTTTG
TGATTTTTTTTTTAATTTAGAGATGATCGCATTACTGAAATATACTATAC
ATCAATAGAAGATTTCTTAAAAGTATGTGCTTGATTTTATCCC
back to top