CX300135

Overview
NameCX300135
Unique NameCX300135
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300135 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21
Identity = 43/78 (55.13%), Postives = 50/78 (64.10%), Query Frame = 3
Query:  246 KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXXXXXXXFYRSKMRKQYTLK 479
            +  WS+G CDCFSD KNCCIT WCPC+TFGQ+AEIVD+GS+SCG  G                  FYR KMR QY +K
Sbjct:   13 EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIYSCFYRGKMRAQYNIK 90          
The following BLAST results are available for this feature:
BLAST of CX300135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH2.380e-2155.13Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC07006F03SK SaltLeaf1 Citrus clementina cDNA clone C07006F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300135 ID=CX300135; Name=CX300135; organism=Citrus clementina; type=EST; length=487bp
TCAAGTTTCAGAACTAATAAACACTTCGCAATTTCTCCTACTCTTCCGAA
TAATATTTGCAAGTGCAGCGGCTCTGGAATCAACTTATTCGAGTGAACTA
CATAATTTTATTTTTCCTGAGTTGCAGATTTTTGAGTCATACAATCATGT
CTTCCATAAAGCCGGATGAGTTCTCGTCCTTGCCGCAAACAACAACTACT
GGGATTCTTATGCTGAATTACCGTTACCAAAACCGGGTGAAAAATAAGAA
TTCTTGGTCCTCGGGCCTCTGTGACTGCTTCTCTGATTATAAAAACTGTT
GCATAACATGCTGGTGTCCATGCATGACTTTTGGGCAAATTGCTGAAATT
GTGGATAAAGGATCATCATCTTGCGGTGTAAATGGGGCGCTTTGCGCTTT
AATGTGCTGCGTGACATGCTGCCCGTGCTGTTACACATGCTTTTACCGAT
CAAAAATGAGGAAGCAGTACACGCTGAAGAAGAAGCC
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