CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.415e-48 Identity = 94/119 (78.99%), Postives = 104/119 (87.39%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL+KALA +MF TEEALVRIDMSEYMEKHA+ RLIGAPPGYVGY+E GQLTE +RRRPY V+L DEI+KAH DVFNV L LDDGRVTDSQG T F NT+IIMTSN+GSQYILD+ Sbjct: 615 GKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYILDV 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 5.825e-48 Identity = 94/119 (78.99%), Postives = 104/119 (87.39%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL+KALA YMF TE+ALVRIDMSEYMEKHA+ RLIGAPPGYVGYEE GQLTE +RRRPY VIL DEI+KAH DVFN+ L LDDGRVTD+QG T F NT+IIMTSN+GSQYILD+ Sbjct: 616 GKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDI 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 6.440e-47 Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+KALA ++F TEEA+VRIDMSEYMEKH++ RLIGAPPGYVGYEE GQLTE VRRRPY VIL DEI+KAH DVFNV+L LDDGRVTDSQG T F NT+IIMTSN+GSQYI + Sbjct: 617 GKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYIFE 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 6.440e-47 Identity = 90/119 (75.63%), Postives = 105/119 (88.24%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL+KALA Y+F TE+A++RIDMSEYMEKHA+ RLIGAPPGYVGY+E GQLTE VRRRPY VIL DEI+KAH DVFNV+L LDDGRVTDS+G T F NT++I+TSN+GSQYILD+ Sbjct: 616 GKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSNIGSQYILDV 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 7.120e-46 Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL+KALA +F TEEALVRIDMSEYMEKHA+ RL+GAPPGYVGYEE GQLTE +RRRPY VIL DEI+KAH DVFNV+L LDDGR+TD+QG F NT+IIMTSN+GSQYILD+ Sbjct: 616 GKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDV 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.534e-45 Identity = 90/119 (75.63%), Postives = 101/119 (84.87%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTELSKALA +F +E ALVRIDMSEYMEKH++ RLIGAPPGYVGYE GQLTE VRRRPY VIL DE++KAH DVFNV+L LDDGRVTD QG T FTNTV+I+TSN+GSQ ILD+ Sbjct: 616 GKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILDL 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 5.103e-44 Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTELSKALA +F +++A+VRIDMSEYMEKH + RLIGAPPGYVGYE GQLTE VRRRPY VIL DE++KAH DVFNV+L LDDGRVTD QG T FTNTV+I+TSN+GSQ IL++ Sbjct: 615 GKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILEL 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.704e-44 Identity = 83/119 (69.75%), Postives = 102/119 (85.71%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL++ALA ++F +EEA+VRIDMSEYMEKHA+ RLIGAPPGYVGYEE GQL+E VRRRPY V+L DE++KAH DVFN++L LDDGR+TDSQG F NT+I+MTSN+GS +IL + Sbjct: 625 GKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNIGSDHILSL 743
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.137e-43 Identity = 87/118 (73.73%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTE KALA ++F E+A+VRIDMSEYMEKHA+ RLIGAPPGYVGYEE GQLTE VRRRPY V+L DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSNVGSQ ILD Sbjct: 612 GKTETVKALAEFLFDDEQAVVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTESVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVLIMTSNVGSQSILD 729
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.137e-43 Identity = 81/122 (66.39%), Postives = 104/122 (85.25%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL++ALA ++F ++ALVR+DMSEYMEKH++ RL+GAPPGYVGYEE GQL+E VRR PY V+L DE++KAH DVFN++L LDDGR+TDSQG T F NTVI+MTSN+GS++ILD+ + Sbjct: 619 GKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNTVIVMTSNIGSEHILDVSGD 740 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |