CX300183

Overview
NameCX300183
Unique NameCX300183
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length423
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1257 contig Ccv1_Contig1257:501..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.479e-43
Identity = 88/116 (75.86%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEEVVA 383
            KLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME                H VA+KN+DVQLADF+ESE+L EQVEAIKKISEYVAQLRRVG+GHGVWHFDQMLLH E V A
Sbjct:  141 KLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVAA 256          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.931e-43
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEEVVA 383
            KLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME                H VA +N+DVQLADFVES+YL EQVEAIK ISEYVAQLRRVG+GHGVWHFDQMLL  EEVVA
Sbjct:  144 KLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQEEEVVA 259          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 3.084e-41
Identity = 83/110 (75.45%), Postives = 90/110 (81.82%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 365
            KLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME                H VA KN DVQLADFVE+EYL EQVEAIK+ISEYVAQLRRVG+GHGVWHFDQMLLH
Sbjct:  132 KLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLH 241          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 8.972e-41
Identity = 82/110 (74.55%), Postives = 90/110 (81.82%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 365
            KLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME                H VA KN DVQLADFVESE+L EQVE+IK+ISEYVAQLRRVG+GHGVWHFDQMLLH
Sbjct:  135 KLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLH 244          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.443e-38
Identity = 77/111 (69.37%), Postives = 87/111 (78.38%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHG 368
            KLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME                H VA+KN+DV LADF+ESE+L EQVEAIK ISEYVAQLRRVG+GHG WHF+QMLL G
Sbjct:  149 KLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLLEG 259          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.109e-38
Identity = 78/110 (70.91%), Postives = 86/110 (78.18%), Query Frame = 3
Query:   42 MEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGE 371
            MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME                  V  KN+DVQL DFVESE+L EQVEAIKKISEYVAQLRR+G+GHGVWHFDQMLL+ E
Sbjct:  143 MEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLNDE 252          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.901e-36
Identity = 71/110 (64.55%), Postives = 86/110 (78.18%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 365
            K MEYQN+RGG+VKL  I+ P+SEF+HAEKGDALYAME                HKVA++N+D QLADFVESE+L EQ+EAIKKIS+Y+ QLR +G+GHGVWHFDQMLL+
Sbjct:  146 KFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.094e-36
Identity = 73/108 (67.59%), Postives = 84/108 (77.78%), Query Frame = 3
Query:   39 LMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLL 362
            LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME                H VA+KN DVQLADF+ES +L+EQVEAIKKISEYV+QLRR+G+GHG WHFDQ LL
Sbjct:  148 LMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.135e-35
Identity = 74/112 (66.07%), Postives = 84/112 (75.00%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGE 371
            KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D QL DF+ESE+L EQ EAI KIS+YVAQLRRVG+GHGVWHFDQMLL  E
Sbjct:  142 KLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEEE 253          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.528e-35
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 365
            KLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME                H VA++++DV LADF+ESE+L EQV+AIKKISEYVAQLRRVGQGHGVW FDQMLL+
Sbjct:  137 KLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLN 246          
The following BLAST results are available for this feature:
BLAST of CX300183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
FRI3_SOYBN1.479e-4375.86Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_TOBAC1.931e-4376.72Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI4_SOYBN3.084e-4175.45Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI2_VIGUN8.972e-4174.55Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_ARATH2.443e-3869.37Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH7.109e-3870.91Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_ARATH3.901e-3664.55Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH5.094e-3667.59Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE1.135e-3566.07Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_TOBAC2.528e-3567.27Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]

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Properties
Property NameValue
Genbank descriptionC07007B11SK SaltLeaf1 Citrus clementina cDNA clone C07007B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300183 ID=CX300183; Name=CX300183; organism=Citrus clementina; type=EST; length=423bp
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACCATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CGAGTATTTACATGAGCAGGTAGAAGCCATCAAAAAGATATCTGAATATG
TTGCTCAGCTGAGAAGAGTTGGCCAGGGGCATGGTGTCTGGCACTTTGAT
CAAATGCTGCTCCATGGGGAGGAAGTCGTCGCATGATGGTGGACACATCT
TGCTTGTCACCTGACTATCCCTA
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