CX300185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 8.048e-32 Identity = 65/85 (76.47%), Postives = 69/85 (81.18%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTFA+EVNAAF ESADNELKGILSVCDEPLVS+DFRC MGDDMVKVIAW+DNEWGYSQRVVDLADIVAN W+ Sbjct: 317 KTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 401
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 3.994e-31 Identity = 64/85 (75.29%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTFA+EVNAAF +SA+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAW+DNEWGYSQRVVDLADIVANNWK Sbjct: 312 KTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 396
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.813e-31 Identity = 64/85 (75.29%), Postives = 67/85 (78.82%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTFA+EVNAAF E+AD ELKGIL VCDEPLVSVDFRC MGDDMVKVIAW+DNEWGYSQRVVDLADIVAN WK Sbjct: 308 KTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 392
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.898e-31 Identity = 63/85 (74.12%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTFA+EVNAAF ++A+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAW+DNEWGYSQRVVDLADIVANNWK Sbjct: 149 KTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 233
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 7.532e-30 Identity = 63/85 (74.12%), Postives = 66/85 (77.65%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTFA+EVN AF ESA EL GILSVCDEPLVSVDFRC MGDD+VKVIAW+DNEWGYSQRVVDLADIVANNWK Sbjct: 321 KTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 405
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.330e-26 Identity = 57/85 (67.06%), Postives = 62/85 (72.94%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KT A+EVN AF ++A NEL GIL VCD PLVSVDFRC MGDDMVKVI+W+DNEWGYSQRVVDLADI AN WK Sbjct: 319 KTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQWK 403
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.737e-26 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 12 AQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 A++VNAAF ++AD LKG+L+VCDEPLVSVDFRC MGDDMVKV+AW+DNEWGYSQRVVDLA +VANNW Sbjct: 311 AEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNW 391
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.625e-24 Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 3 Query: 12 AQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 A++VNAAF ++A+ LKGIL VCD PLVSVDFRC MGDDMVKV+AW+DNEWGYSQRVVDLA +VAN W Sbjct: 342 AEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.729e-24 Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 KTFA+EVNAAF E+A+ +KG+L V D PLVS+DF+C MGDDMVKV+AW+DNEWGYSQRVVDLA++ A W Sbjct: 289 KTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAEVTAKKW 372
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.003e-23 Identity = 50/81 (61.73%), Postives = 58/81 (71.60%), Query Frame = 3 Query: 12 AQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 A++VN AF ++A LKG+L VCD PLVSVDFRC MG DMVKV+AW+DNEWGYSQRVVDLAD+VAN W Sbjct: 341 AEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKW 421 The following BLAST results are available for this feature:
BLAST of CX300185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300185 ID=CX300185; Name=CX300185; organism=Citrus clementina; type=EST; length=430bpback to top |