CX300189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.858e-23 Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 4 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 333 PW I++ E++ ++R D+PG+++ DVKV VE+ MLVIK E D S W S Y SY TR+ LPDN E +K++AE+K+GVLYITIPK K++D+ VQ Sbjct: 79 PWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-------WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.914e-22 Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 4 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 333 PW I+E E++ K+R D+PG+S+ DVK+ VE+++LVIK E+ + + ++ W SY TR+ LPDN E +KI+AE+K+GVL+ITIPK K++D+ +Q Sbjct: 128 PWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE----------DSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.914e-22 Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 4 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 333 PW I++ E++ ++R D+PG+S+ DVKV VE+ +LVIK++ + N E+ W Y Y TR+ LPDN E EK++AE+KDGVLYITIPK ++D+ +Q Sbjct: 132 PWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGG---------EDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.266e-22 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 1 TPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINV 330 TPW I + EN+ K+R D+PG+S+ DVKV VE MLVIK E + + ++ W N Y SY TR++LPDNV +KI+AE+K+GVL+I+IPK K++D+ + Sbjct: 133 TPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGR-------DKHSWGRN-YSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.043e-21 Identity = 49/110 (44.55%), Postives = 75/110 (68.18%), Query Frame = 1 Query: 4 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 333 PW I++ EN+ K+R D+PG+S+ +VKV VE+ +LVIK E ++ E+ D S W N Y SY TR++LPDNV+ +K++AE+K+GVL I+IPK K+ D+ ++ Sbjct: 141 PWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEH-KKEESGKDDS-------WGRN-YSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.832e-19 Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 4 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 333 PW + E + + ++R D+PG+SR +VKV VE+ LVI+ E + +GS + W SY R+ALPD + K++AE+K+GVL +T+PK K++D+ VQ Sbjct: 134 PWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSG---DGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQVQ 240
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18 Identity = 43/111 (38.74%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 4 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAE-KAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 333 PW I E E + K+R D+PG+SR +V+V VE+ LVI+ E K + E +G + W SY R+ALPD + +++AE+K+GVL +++PK + K++D+ VQ Sbjct: 132 PWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGG----DGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQVQ 238
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 40/108 (37.04%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 13 IRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKASSTAK-IVDINVQ 333 ++E ++ YK+R +VPG+++ DVK+ V + +L IK + ++A + + EE+E W S YG Y+T ++LPD+ + E I+AE+K+GVL + IP+ K + +I+V+ Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD----HKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 232
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.825e-12 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 7 WAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ*D 339 W RETE+ +RLD+PG+ + DVK+ VE++ L IK E+ +E EE +G +S+RI LP+ + + + I+AE+K+GVL +T+PK + INV+ D Sbjct: 103 WDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEG-----------AKESEEKEKSG-RRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202
BLAST of CX300189 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11 Identity = 38/112 (33.93%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 7 WAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKIQAEVKDGVLYITIPKASSTAK--IVDINVQ 333 W RETE+ +R+D+PG+++ DVK+ VE++ L+IK E A+ + EEE Y++RI LPD + + ++I+AE+K+GVL + +PK + ++ + V+ Sbjct: 114 WDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGD--------EEESA------RRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211 The following BLAST results are available for this feature:
BLAST of CX300189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300189 ID=CX300189; Name=CX300189; organism=Citrus clementina; type=EST; length=383bpback to top |