CX300226

Overview
NameCX300226
Unique NameCX300226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300226 vs. ExPASy Swiss-Prot
Match: FBL15_ARATH (F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 1.848e-37
Identity = 77/138 (55.80%), Postives = 87/138 (63.04%), Query Frame = 2 
Query:   20 ENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHXXXXXXXXXXXXKEVDVAXXXXXXXXXXXXXXXETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGSLRAACPSLKRIFSS 433
            +N  E  +  NRLLQNLNCVGCPNIRKV IPP AR +H            KEVD+                E LKL CP+L SLFLQSCN+DE GVE+AI+ C  LETLD+RFCPKI S SM   R  CPSLKR+FSS
Sbjct:  847 DNTQEPAETANRLLQNLNCVGCPNIRKVLIPPAARFYHLSTLNLSLSVNLKEVDLTCSNLVLLNLSNCCSLEVLKLGCPRLASLFLQSCNMDEAGVEAAISGCSSLETLDLRFCPKISSVSMSKFRTVCPSLKRVFSS 984
The following BLAST results are available for this feature:
BLAST of CX300226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL15_ARATH1.848e-3755.80F-box/LRR-repeat protein 15 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC07007F08SK SaltLeaf1 Citrus clementina cDNA clone C07007F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300226 ID=CX300226; Name=CX300226; organism=Citrus clementina; type=EST; length=487bp
CTGTGGAATTTTTCCTCATGAGAACATTCATGAGTCAATTGACCAGCCCA
ACCGCCTACTGCAGAATCTCAACTGTGTCGGTTGTCCGAATATTAGGAAA
GTTTTCATCCCACCCCAGGCCCGCTGTTTTCACTTGTCATCTTTAAATCT
ATCTCTATCTGCCAACTTGAAGGAAGTTGATGTTGCTTGTTTCAATTTGT
GCTTTCTTAATTTGAGCAATTGCTGCTCTTTGGAAACATTGAAGCTTGAT
TGCCCAAAATTGACTAGTCTATTTCTTCAGTCCTGTAACATTGATGAAGA
AGGGGTTGAAAGTGCAATCACTCAGTGTGGCATGCTTGAGACTCTGGATG
TCCGGTTTTGTCCAAAGATATGCTCAACGAGCATGGGCAGCTTACGTGCA
GCGTGCCCTAGTTTGAAGCGCATCTTCAGCAGCCTGACCACTTCATGATA
CAACAGAAAATTTTGCTCTTTGTTTTTTTAAAAATTA
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