CX300249

Overview
NameCX300249
Unique NameCX300249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10228 contig Ccv1_Contig10228:432..988. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 6.370e-97
Identity = 172/185 (92.97%), Postives = 178/185 (96.22%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTIDGGV SFAFKPGKY AKKFCLEPTSFTVKAESVNKNAPPDFQ TKLMTRLTYTLDEIEGPFEVS DGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNTSSSTGKITLSVT+SK
Sbjct:  109 GTANQCPTIDGGVASFAFKPGKYNAKKFCLEPTSFTVKAESVNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSK 293          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 5.047e-94
Identity = 166/185 (89.73%), Postives = 176/185 (95.14%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTI+GGV SFAFKPGKY AKKFCLEPTSFTVKAE V+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVSPDGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKITLSVT+SK
Sbjct:  106 GTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSK 290          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 4.272e-93
Identity = 164/184 (89.13%), Postives = 174/184 (94.57%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKS 552
            GTANQCPTIDGGVDSFAFKPGKY AKKFCLEPTSFTVKAE V+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVSPDGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F  +FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKIT +VTKS
Sbjct:  109 GTANQCPTIDGGVDSFAFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKS 292          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 8.909e-91
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPT++GGVDSFAFKPGKY AKKFCLEPT F VKAE ++KN+ PDFQNTKLMTRLTYTLDEIEGPFEVS DGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN KN +SS G ITLSVT SK
Sbjct:  107 GTANQCPTVEGGVDSFAFKPGKYTAKKFCLEPTKFAVKAEGISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSK 291          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 1.985e-90
Identity = 157/185 (84.86%), Postives = 171/185 (92.43%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTI+GG +SF +K GKY  KK CLEPTSFTVKAE +NKNAPP+FQ TKLMTRLTYTLDEIEGPFEV+PDGT+KF EKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPE+F G +LVPSYRGSSFLDPKGRGGS GYDNA+ALPAGGRGDEE+L KENIK+ SSSTGKITLSVTKSK
Sbjct:  106 GTANQCPTIEGGTESFGYKTGKYTLKKLCLEPTSFTVKAEGINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSK 290          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.680e-89
Identity = 154/185 (83.24%), Postives = 173/185 (93.51%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTIDGG ++F+FK GKY  KKFC EPTSFTVKA+SV+KNAPPDFQNTKLMTRLTYTLDEIEGPFEV  DG++KF E+DGIDYAAVTVQLPGGERVPFLFT+KQL ASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L+KEN+KNT++S G+ITL +TKSK
Sbjct:  108 GTANQCPTIDGGSETFSFKAGKYTGKKFCFEPTSFTVKADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSK 292          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 8.338e-89
Identity = 158/185 (85.41%), Postives = 170/185 (91.89%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTIDGGVDSF+FKPGKY AKK CLEPTSFTVK+E V KN P  FQNTKLMTRLTYTLDEIEGPFEVS DG++KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP++F GEFLVPSYRGSSFLDPKGRG STGYDNA+ALPAGGRGDEE+L KEN K+ +SS GKITLSVT++K
Sbjct:  105 GTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTK 289          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 8.338e-89
Identity = 153/185 (82.70%), Postives = 173/185 (93.51%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTIDGG ++F+FKPGKY  KKFC EPTSFTVKA+SV+KNAPP+FQNTKLMTRLTYTLDEIEGPFEV+ DG++ F E+DGIDYAAVTVQLPGGERVPFLFT+KQL ASGKP++F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT++S G+ITL VTKSK
Sbjct:  109 GTANQCPTIDGGSETFSFKPGKYAGKKFCFEPTSFTVKADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSK 293          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.378e-83
Identity = 154/185 (83.24%), Postives = 163/185 (88.11%), Query Frame = 1
Query:    1 GTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSK 555
            GTANQCPTIDGGVDSF FK GKY+ KKFCLEPTSFTVKAE + KN PP FQ TKLMTRLTYTLDE+EGP EV    T+KF EKDGIDYAAVTVQLPGGERV FLFT+KQLVA+GKPE+F   FLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEE+LAKEN+KN SSSTG ITLSVTKSK
Sbjct:  103 GTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPESF-RPFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSK 286          
BLAST of CX300249 vs. ExPASy Swiss-Prot
Match: PSBO_VOLCA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 7.125e-56
Identity = 110/184 (59.78%), Postives = 129/184 (70.11%), Query Frame = 1
Query:    1 GTANQCPTID-GGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTK 549
            G AN CP ++ G  D      G Y+ + FC+EPTSFTVK ESV K    +F  TKLMTRLTYTLD + G  +V  DG+ +  E+DGIDYAA TVQLPGGERV FLFTIKQ    G  +N  G+F+VPSYRGSSFLDPKGRGGSTGYDNA+ALPA  R D E+L KEN+K+T +  G    SV K
Sbjct:   70 GIANTCPVLEKGSTDLSELSAGTYKLENFCIEPTSFTVKEESVFKGGETEFVKTKLMTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAK 251          
The following BLAST results are available for this feature:
BLAST of CX300249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_TOBAC6.370e-9792.97Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC5.047e-9489.73Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU4.272e-9389.13Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL8.909e-9186.49Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG1.985e-9084.86Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH1.680e-8983.24Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_PEA8.338e-8985.41Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH8.338e-8982.70Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_WHEAT1.378e-8383.24Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_VOLCA7.125e-5659.78Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionC07007H07SK SaltLeaf1 Citrus clementina cDNA clone C07007H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300249 ID=CX300249; Name=CX300249; organism=Citrus clementina; type=EST; length=557bp
GGAACTGCTAACCAGTGCCCAACCATTGATGGCGGAGTTGACTCTTTTGC
CTTCAAACCTGGCAAATACCAGGCTAAGAAGTTCTGCCTAGAACCAACTT
CCTTCACTGTCAAGGCTGAGAGTGTCAACAAGAATGCCCCACCAGATTTC
CAGAACACCAAGCTCATGACCCGCCTTACCTACACCCTTGACGAGATTGA
GGGACCTTTTGAAGTGTCCCCCGATGGCACCATTAAGTTTGTGGAGAAGG
ATGGAATTGACTATGCTGCTGTGACAGTTCAGCTGCCTGGAGGCGAGCGT
GTGCCCTTCCTTTTCACCATCAAACAATTGGTAGCATCAGGCAAGCCTGA
GAATTTCGGAGGAGAGTTCCTTGTACCATCATACCGTGGATCATCCTTCT
TGGACCCAAAGGGAAGGGGTGGTTCAACTGGTTATGACAATGCTATTGCA
TTGCCTGCTGGCGGAAGAGGGGATGAGGAAGATCTCGCCAAGGAGAATAT
CAAGAATACTTCATCTTCAACAGGGAAGATCACCCTCAGCGTTACCAAGA
GCAAGCC
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