CX300251

Overview
NameCX300251
Unique NameCX300251
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:900..1477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.628e-64
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKPSMVTPGAE K++ATP+QVA YTLKLL  R+PPAVPGI +LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGGRPENV AAQ TLL RAKANSLAQLGKYTGEGESEEAK GMFVKGYTY
Sbjct:  266 LKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 5.854e-64
Identity = 115/133 (86.47%), Postives = 124/133 (93.23%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKPSMVTPGAECK++ATP+QV++YTLKLLHRRIPPAVPGI +LSGGQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQD LL RAKANSLAQLGKYT +GE+ EAK GMFVK Y Y
Sbjct:  256 LKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 4.955e-63
Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKPSMVTPGAE  ++ATP+QVA YTLKLL  RIPPAVPGI +LSGGQSE+EATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+ ENVKAAQD LL RAKANSLAQLGKYTGEGESEEAK GMFVKGYTY
Sbjct:  267 LKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60
Identity = 111/133 (83.46%), Postives = 122/133 (91.73%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGI +LSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAK+ +FVKGY+Y
Sbjct:  224 LKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 108/133 (81.20%), Postives = 119/133 (89.47%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGI +LSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAK+    +GY+Y
Sbjct:  218 LKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.707e-55
Identity = 101/133 (75.94%), Postives = 118/133 (88.72%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKPSMVTPGAE K KA+P+ VA++TL +L RR+PPAVPGI +LSGGQSE EATLNLNAMNQ PNPWHVSFSYARALQN+ L+TW G+PE ++A+Q  LL RAKANSLAQLGKY+ EGE+E+AK+GMFVKGYTY
Sbjct:  259 LKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 8.492e-47
Identity = 99/129 (76.74%), Postives = 103/129 (79.84%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVK 387
            LKPSMV PGA    K  P+QVA+Y LKLLHRR  P VPGI  LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTW    ENVK AQD     AK+NSLAQLGKYTGEGESEE K+ MFVK
Sbjct:  264 LKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.963e-41
Identity = 87/133 (65.41%), Postives = 99/133 (74.44%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKP+MVTPGA+CK KA P +VAEYTLK+L  R PP VPGI +LSGGQSE+E+TLNLNAMNQ PNPWHVSFSYARAL NT LKTW   P  V+A +     R KANS AQ GKY    E +EA +GM+ KG  Y
Sbjct:  242 LKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.164e-36
Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGPN-PWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKP+MV  G +C  KAT +Q+ ++T++ L R +PPA+ G+ +LSGGQ+E+EAT NLNAMN  PN PW +SFSY RALQ + + TW G   NV+AA+   L RAK NSLAQLGKYTGE  +  A   ++VK Y Y
Sbjct:  224 LKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.962e-35
Identity = 76/135 (56.30%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKP++VTPG+E K K TP+ +AEYT++ L R +P AVPG+ +LSGGQSE EATLNLNAMN  +   PW +SFSY RALQ + LK W G+ ENV  AQ+  L RAK NS A LGKY G     +A   + VK Y Y
Sbjct:  224 LKPNIVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of CX300251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC2_ARATH2.628e-6488.72Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC_ORYSJ5.854e-6486.47Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_ARATH4.955e-6387.22Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA6.697e-6083.46Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA1.182e-5681.20Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH1.707e-5575.94Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_SPIOL8.492e-4776.74Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE6.963e-4165.41Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI5.164e-3654.48Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_SPIOL1.962e-3556.30Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC07007H09SK SaltLeaf1 Citrus clementina cDNA clone C07007H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300251 ID=CX300251; Name=CX300251; organism=Citrus clementina; type=EST; length=578bp
CTGAAGCCTAGCATGGTCACTCCTGGTGCTGAATGCAAGGAGAAGGCCAC
ACCACAACAGGTTGCTGAGTACACACTCAAGCTCCTTCACAGGAGAATAC
CTCCAGCTGTCCCCGGAATCAAGTACTTGTCTGGTGGGCAATCTGAGGTT
GAGGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCA
CGTATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACAT
GGGGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACC
CGTGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGG
AGAATCAGAGGAGGCCAAGAGAGGAATGTTCGTCAAGGGATACACCTACT
AAATTTGTTAGCACGAAGATCATAAGAATGGTGAACAAATTTGAAATGAG
TAGTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATT
TTTGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAA
TGACATGAAAAAAAAAAAAAAAAAAAAA
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