CX300252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_SOLLC (Arginine decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 3.814e-47 Identity = 83/109 (76.15%), Postives = 98/109 (89.91%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 +DQLKQRC+EQFKDG+L IEQLA VD +CD+V+K IG +DPVRTYHVNLS+FTSIPD+W QLFPIVPIH LDE+P +RG+LSDLTCDSDGK+DKFIGG +SLPLHE+ Sbjct: 347 SDQLKQRCVEQFKDGSLDIEQLAAVDSICDWVSKAIGVADPVRTYHVNLSVFTSIPDFWGFSQLFPIVPIHRLDEKPTMRGILSDLTCDSDGKVDKFIGGESSLPLHEI 455
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 6.506e-47 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 DQLKQRC+E FK+G+LGIEQLA VDGLC++V K IGASDPV TYHVNLS+FTSIPD+W I QLFPIVPIH LD+RP RG+LSDLTCDSDGKI+KFIGG +SLPLHEM Sbjct: 438 DQLKQRCVEGFKEGSLGIEQLAGVDGLCEWVIKAIGASDPVLTYHVNLSVFTSIPDFWGIDQLFPIVPIHKLDQRPAARGILSDLTCDSDGKINKFIGGESSLPLHEM 545
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.227e-45 Identity = 83/108 (76.85%), Postives = 96/108 (88.89%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 DQLKQRC+E FK+G L IEQLA+VDGLC++V K IGASDPV TY++NLS+FTSIPD W I QLFPIVPIH LD+RPG RG+LSDLTCDSDGKI+KFIGG +SLPLHE+ Sbjct: 451 DQLKQRCVEGFKEGVLSIEQLASVDGLCEWVLKAIGASDPVHTYNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLTCDSDGKINKFIGGESSLPLHEL 558
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.227e-45 Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 +Q K+RC+E+FK GTLGIEQLA VDGLCD + + IG DPV+ YHVNLS+FTS+PD+W I QLFPIVPIH LDE+P RG+LSDLTCDSDGKIDKFIGG +SLPLHEM Sbjct: 466 EQFKKRCVEEFKQGTLGIEQLAAVDGLCDLITETIGVKDPVKKYHVNLSVFTSVPDFWGINQLFPIVPIHRLDEKPTARGILSDLTCDSDGKIDKFIGGESSLPLHEM 573
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.953e-45 Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 DQLKQRC+E+FK+G+L IEQLA VDGLC++V KEIG SDPV TY+VNLS+F SIPD+W I QLFPIVPIH LD+RP RG+LSDLTCDSDGKI+KFIGG +SLPLHE+ Sbjct: 444 DQLKQRCVEEFKEGSLSIEQLAGVDGLCEWVTKEIGGSDPVLTYNVNLSVFHSIPDFWGIDQLFPIVPIHRLDQRPVARGILSDLTCDSDGKINKFIGGESSLPLHEL 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.270e-42 Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 ADQLK+RC +QFKDG LG+E LA VD LC+ VA+ +GA++P RTYH+NLS+FTS+PD WAIGQ+FPI+PI L ERP V GVLSDLTCDSDGK+D FIGG SLPLHE+ Sbjct: 453 ADQLKRRCADQFKDGVLGLEHLAAVDSLCEIVARGMGAAEPPRTYHINLSVFTSLPDMWAIGQMFPIIPIQRLGERPAVDGVLSDLTCDSDGKVDHFIGGRHSLPLHEL 561
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.694e-42 Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 3 Query: 12 LKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 LKQRC+E FKDG LG+EQLA VDGLC+ V+K +G +D V TY+VNLS+FTSIPD+W IGQLFPI+PIH LD++P RG+LSDLTCDSDGKIDKFIG +SLPLHE+ Sbjct: 465 LKQRCVELFKDGCLGMEQLAAVDGLCELVSKALGVADGVCTYNVNLSVFTSIPDFWGIGQLFPIMPIHRLDQQPKARGILSDLTCDSDGKIDKFIGDESSLPLHEL 570
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.825e-42 Identity = 75/108 (69.44%), Postives = 93/108 (86.11%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 +++K+RC+EQFK GT+ +EQLA V+GLC+ V K +GA++ VR YHVNLSIFTS+PD W I Q+FPI+PIH LDE+P VRG+LSDLTCDSDGKIDKFI G +SLPLHEM Sbjct: 454 EEMKERCVEQFKQGTVCMEQLAAVEGLCELVRKAVGAAESVRRYHVNLSIFTSVPDAWGIEQVFPIIPIHRLDEKPSVRGILSDLTCDSDGKIDKFINGESSLPLHEM 561
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPE2_THECC (Arginine decarboxylase (Fragment) OS=Theobroma cacao GN=SPE2 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.230e-42 Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKF 293 ADQ KQRC+EQFK+GTLGIEQLA+VDGLC++V K IGASDPV TY++NLS+FTSIPD W I QLFPIVPIH LD+RPG RG+LSDLTCDSDGKI+KF Sbjct: 310 ADQWKQRCVEQFKEGTLGIEQLASVDGLCEWVLKAIGASDPVHTYNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLTCDSDGKINKF 406
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_ANASP (Biosynthetic arginine decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=speA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.156e-19 Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLC--------------DFVAKEIGASDPVRT--YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI 296 A Q K+ I +F G L + + A + L D+V E+ + + Y++NLS+F S PD WAI QLFPI+PIH LDE P RG+L+DLTCDSDGKID+FI Sbjct: 444 ATQFKEEAISRFNLGILRLRERAKAERLYWACCQKILDIIRQHDYVPDELEDLEKIMASIYYINLSVFQSAPDCWAIDQLFPIMPIHRLDEEPTQRGILADLTCDSDGKIDRFI 557 The following BLAST results are available for this feature:
BLAST of CX300252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300252 ID=CX300252; Name=CX300252; organism=Citrus clementina; type=EST; length=332bpback to top |