CX300339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.944e-23 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKAG+ V ++ K SAS +P+LSIKA++KDVG I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAGFPHN+VF Sbjct: 16 GLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVF 110
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.553e-22 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 74 GLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKAGA+ + V G++ K +A+ V +L++KA+LKDVG +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHNVVF Sbjct: 16 GLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVF 112
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.471e-22 Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKA + V ++ K SAS +P+LSIKA+LK+VG ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAGFPHNV+F Sbjct: 16 GLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLF 110
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.369e-19 Identity = 52/99 (52.53%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 74 GLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKA T A+++ +T +AVP+LS+KA+LK+VG +EVLLGG DGSLAF+P FSV+SGE+IVFKNNAGFPHNVVF Sbjct: 17 GLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVF 110
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.672e-18 Identity = 51/98 (52.04%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLK + ST+ S SA PKL++K++LKD G +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAGFPHNVVF Sbjct: 16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVF 113
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.353e-18 Identity = 51/95 (53.68%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKA +T +T+K A A P++SIKA+LKDVG EVLLG DG LAFVPS S++SGEKI FKNNAGFPHNVVF Sbjct: 17 GLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVF 107
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.414e-17 Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKA + ++ +A A PKL++K++LK+ G IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG+PHNVVF Sbjct: 16 GLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVF 109
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.174e-17 Identity = 46/95 (48.42%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLK A + + S S P+L ++A+LKD G +EVLLG DG LAFVPSS VS+GE IVFKNNAGFPHNVVF Sbjct: 16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVF 110
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_CUCPE (Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.574e-15 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IEVLLGGDDGSLAF+P+ FSV++GEKIVFKNNAGFPHNVVF Sbjct: 1 IEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_CUCSA (Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.465e-14 Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IE+LLGGDDGSLAFVP++F+V+SGEKI FKNNAGFPHNVVF Sbjct: 1 IEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVF 41 The following BLAST results are available for this feature:
BLAST of CX300339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300339 ID=CX300339; Name=CX300339; organism=Citrus clementina; type=EST; length=359bpback to top |