CX300349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 8.950e-56 Identity = 110/141 (78.01%), Postives = 122/141 (86.52%), Query Frame = 1 Query: 4 TLRLLF-------QEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLK 405 TLRLLF K D F GTLP+GSN+Q+FV+EFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNV+ AGP++GASMNP RSLGPA+V S Y+GLWIYIV+P +GA +GAWVYNMVRYTDKPLREITKS SFLK Sbjct: 146 TLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGLWIYIVSPIVGAVSGAWVYNMVRYTDKPLREITKSGSFLK 286
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 1.994e-55 Identity = 101/140 (72.14%), Postives = 120/140 (85.71%), Query Frame = 1 Query: 1 GTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGRS 420 GTLRLLF DQF+GT+P G+N+QAFV EFI+TF+LMFVI GVATDNRA+GE AG+A+GST+LLNV+ GP+TGASMNPARSLGPA V +Y+G+WIY++AP +GA AGAWVYN+VRYTDKPL E TKSASFLKG S Sbjct: 131 GTLRLLFMGNHDQFSGTVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRAVGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGEYEGIWIYLLAPVVGAIAGAWVYNIVRYTDKPLSETTKSASFLKGRAAS 270
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.292e-54 Identity = 99/139 (71.22%), Postives = 120/139 (86.33%), Query Frame = 1 Query: 1 GTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGR 417 GTLRL+F + + F GTLPAGS++Q+ V+EFIITFYLMFVISGVATDNRAIGELAGLAVG+T+LLNV+ AGPI+GASMNPARSLGPA++ +Y+ +W+YIV P GA AGAW YN++R+T+KPLREITKS SFLK R Sbjct: 141 GTLRLMFGGRHEHFPGTLPAGSDVQSLVLEFIITFYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIRFTNKPLREITKSGSFLKSMNR 279
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 7.091e-53 Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 1 Query: 1 GTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGR 417 GTLRL+F + + F GTLP GS +Q+ V+E I TFYLMFVISGVATDNRAIGELAGLAVG+T+LLNV+ AGP++GASMNPARS+GPA+VS +Y +W+Y+V P +GA AGAW YN++R+T+KPLREITKS SFLK R Sbjct: 137 GTLRLMFGGRHEHFPGTLPTGSEVQSLVIEIITTFYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGEYTSIWVYVVGPVVGAVAGAWAYNLIRFTNKPLREITKSTSFLKSTSR 275
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.580e-52 Identity = 103/141 (73.05%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 4 TLRLLF-------QEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLK 405 TLRLLF K D F G+ P GS++QAF MEFI+TFYLMF+ISGVATDNRAIGELAGLA+GSTVLLNV+ A P++ ASMNP RSLGPA+V YKG+WIY+VAP LGA AGAWVYN VRYTDKPLREITKS SFLK Sbjct: 149 TLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKGIWIYLVAPTLGAIAGAWVYNTVRYTDKPLREITKSGSFLK 289
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 5.082e-51 Identity = 93/138 (67.39%), Postives = 115/138 (83.33%), Query Frame = 1 Query: 7 LRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGRS 420 LR LF + F GT PAGS++Q+ MEFIITFYLMFV+SGVATDNRAIGELAGLAVG+TVL+NV+FAGPI+GASMNPAR++GPAI+ +Y G+W+YI P GA AGAW YN++R+TDKPLREIT +ASF++ R+ Sbjct: 149 LRALFGGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVYIAGPVFGAVAGAWAYNLIRFTDKPLREITMTASFIRSTRRN 286
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 4.922e-46 Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 1 Query: 4 TLRLLF------QEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGR 417 TLR++F + F GT PAGS QA +EF+I+F+LMFV+SGVATDNRAIGELAGLAVG+TV +NV+FAGP+TGASMNPARSLGPA+V+ +Y G+W+Y+ AP G GAW YN++R+TDKPLR+I +ASFL+ + R Sbjct: 158 TLRVVFGGGGGGARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNRAIGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGGVWVYVAAPVSGTVCGAWAYNLLRFTDKPLRDIANTASFLRRSSR 301
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.429e-46 Identity = 89/139 (64.03%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 4 TLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGRS 420 TLRL+F+ + F GT PA S +A V E II+F LMFVISGVATDNRA+GELAG+AVG T+++NV AGPI+GASMNPARSLGPA+V YK +W+YIV P LG +G +VYN++R+TDKPLRE+TKSASFL+ S Sbjct: 137 TLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNRAVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPVLGVISGGFVYNLIRFTDKPLRELTKSASFLRAVSPS 275
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.191e-45 Identity = 90/138 (65.22%), Postives = 108/138 (78.26%), Query Frame = 1 Query: 4 TLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGR 417 TLRL+F F GT P S+ QA V E II+F LMFVISGVATD+RA GELAG+AVG T++LNV AGPI+GASMNPARSLGPAIV +YKG+W+YIV P +G AG +VYN +R+TDKPLRE+TKSASFL+ + Sbjct: 137 TLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIFAGGFVYNFMRFTDKPLRELTKSASFLRSVAQ 274
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.859e-44 Identity = 86/135 (63.70%), Postives = 106/135 (78.52%), Query Frame = 1 Query: 1 GTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLK 405 GTL LLF + GT+P GSN Q+ +E II+F LMFVISGVATD+RAIG++AG+AVG T+ LNV AGPI+GASMNPARS+GPAIV Y GLW+Y+V P +G AGA+VYN++R TDKPLRE+ KSAS L+ Sbjct: 135 GTLALLFDVTPQAYFGTVPVGSNGQSLAIEIIISFLLMFVISGVATDDRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKHVYTGLWVYVVGPIIGTLAGAFVYNLIRSTDKPLRELAKSASSLR 269 The following BLAST results are available for this feature:
BLAST of CX300349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300349 ID=CX300349; Name=CX300349; organism=Citrus clementina; type=EST; length=622bpback to top |