CX300353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 6.087e-92 Identity = 158/178 (88.76%), Postives = 166/178 (93.26%), Query Frame = 3 Query: 3 FVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 536 FVNGA+VG+R VFQVDQGLGIGSKFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGDLPSYDAF LGGPYSVRGYNMGELGAARNI E+GAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPT VYRR G GSSYG G KLGLVRAEYAVDHN GTGALFFRFGERY Sbjct: 641 FVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVKLGLVRAEYAVDHNNGTGALFFRFGERY 818
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: TOC75_PEA (Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 4.823e-89 Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 3 Query: 3 FVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 536 FVNG IVG RN+FQVDQGLG+GS FPFFNRHQLT+T+F QL VEEGA K PPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGE+GAARNILEL AEIRIP+K THVYAF EHG DLGSSKDVKGNPT VYRRMG GSSYG G KLGLVRAEYAVDHN+GTGA+FFRFGER+ Sbjct: 632 FVNGTIVGSRNMFQVDQGLGVGSNFPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEIRIPIKGTHVYAFAEHGTDLGSSKDVKGNPTVVYRRMGQGSSYGAGMKLGLVRAEYAVDHNSGTGAVFFRFGERF 809
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 6.519e-86 Identity = 147/177 (83.05%), Postives = 161/177 (90.96%), Query Frame = 3 Query: 6 VNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 536 VNGA+VGE+N+FQVDQGLGIG+ FP FNRHQL+LT F QLKQVEEG++KP PPVLVLHG YGGC+GDLPSYD F LGGP SVRGY+MGELGAA+NILELGAEIRIPVKNTHVYAF EHGNDLGSSKDVKGNPT +YR+MGHGSSYG+G KLG+VRAEY V HN GTGALF RFGERY Sbjct: 220 VNGAVVGEKNIFQVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCIGDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPVKNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVKLGMVRAEYTVRHNRGTGALFLRFGERY 396
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: TOC75_ORYSJ (Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 1.272e-81 Identity = 138/178 (77.53%), Postives = 158/178 (88.76%), Query Frame = 3 Query: 3 FVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 536 FVNGA++G+R +FQ+DQGLGIGSK PFFNRHQLTLT+F L + E+GA KP P VLVLHGHY GCVGDLPSYDAFTLGGPYSVRGY MGELGA+RN+LE+ +E+RIPV+NT+VY FVEHG DLGSSKDVKGNPTE +RR+GHGSSYG+G KLGLVR EY VDHN GTG +FFRFGER+ Sbjct: 640 FVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF 817
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11 Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 36 VFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNIL----ELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAK----LGLVRAEYAVDHNTGTGALFFRFGERY 536 VF ++QGL I ++ FNR L + +++ P L+L G G+ ++AF +GG SVRGY G +G+ R+ E+ + P++ F ++G+DL S V G+P + G G YGVG + LG +R EYA + A F FG Y Sbjct: 505 VFNIEQGLPILPEWLSFNRVTARLRQGYEIG----------PARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGV---VFGDYGSDLSSGPKVPGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYAFNDKQ---ARRFHFGVGY 663
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 36 VFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNIL----ELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAK----LGLVRAEYAVDHNTGTGALFFRFGERY 536 VF ++QGL I ++ FNR L + +++ P L+L G G+ ++AF +GG SVRGY G +G+ R+ E+ + P++ F ++G+DL S V G+P + G G YGVG + LG +R EYA + A F FG Y Sbjct: 505 VFNIEQGLPILPEWLSFNRVTARLRQGYEIG----------PARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGV---VFGDYGSDLSSGPKVPGDPAGARGKPGSGYGYGVGIRVDSPLGPLRLEYAFNDKQ---ARRFHFGVGY 663
BLAST of CX300353 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 54/170 (31.76%), Postives = 80/170 (47.06%), Query Frame = 3 Query: 39 FQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLV-LHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKN-THVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAK----LGLVRAEYAV-DHNTGTGALFFRFG 527 F ++QGL + ++ FNR + +G + P L L G G VG ++AF +GG SVRGY G +G+ R+ + E+ PV+ F ++G D+GS V G+P + G G YG+G + LG +R EYA D + G F FG Sbjct: 573 FNMEQGLPVLPEWLCFNR---------VTGRARKGIHIGPARFLFSLSG--GHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDQHAGR----FHFG 727 The following BLAST results are available for this feature:
BLAST of CX300353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300353 ID=CX300353; Name=CX300353; organism=Citrus clementina; type=EST; length=556bpback to top |