CX300409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 8.084e-21 Identity = 53/84 (63.10%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP S+KTFA+EVNAAFRESA+NELKGILSVC EPLVS DFRC MGDDM Sbjct: 289 LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDM 372
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 2.601e-19 Identity = 50/84 (59.52%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP S+KTFA+EVNAAFR+SA ELKGIL VC EPLVS DFRC MGDDM Sbjct: 284 LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDM 367
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.793e-19 Identity = 49/84 (58.33%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP S+KTFA+EVNAAFR++A ELKGIL VC EPLVS DFRC MGDDM Sbjct: 121 LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDM 204
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18 Identity = 49/84 (58.33%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP S+KTFA+EVN AFRESA EL GILSVC EPLVS DFRC MGDD+ Sbjct: 293 LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDL 376
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 46/84 (54.76%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP S+KT A+EVN AFR++A NEL GIL VC PLVS DFRC MGDDM Sbjct: 291 LKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDM 374
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.830e-16 Identity = 44/85 (51.76%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 7 ALKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 AL+G + LR PTP S+KTFA+EVNAAFRE+A+ ELKGIL VC EPLVS DFRC MGDDM Sbjct: 279 ALRGSSMALPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDM 363
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.830e-16 Identity = 44/85 (51.76%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 7 ALKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 +LKGKLNGIALR PTP +KTFA+EVNAAFRE+AN +KG+L V PLVS DF+C MGDDM Sbjct: 260 SLKGKLNGIALRVPTPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDM 344
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.131e-14 Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTF-AQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP ++K A++VNAAFR++A+ LKG+L+VC EPLVS DFRC MGDDM Sbjct: 279 LKGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDM 363
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.290e-14 Identity = 41/84 (48.81%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTFAQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP +KTFA+E+N AF+E+A L G+L+V EPLVS DFRC MG DM Sbjct: 219 LKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRCTDVSSTIDSSLTMVMGADM 302
BLAST of CX300409 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.571e-14 Identity = 43/85 (50.59%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 10 LKGKLNGIALREPTPYXXXXXXXXXXSQKTF-AQEVNAAFRESANNELKGILSVCHEPLVSADFRCFXXXXXXXXXXXXXMGDDM 261 LKGKLNGIALR PTP ++K A++VNAAFR++A LKGIL VC PLVS DFRC MGDDM Sbjct: 310 LKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDM 394 The following BLAST results are available for this feature:
BLAST of CX300409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300409 ID=CX300409; Name=CX300409; organism=Citrus clementina; type=EST; length=262bpback to top |