CX300410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.260e-34 Identity = 70/99 (70.71%), Postives = 77/99 (77.78%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERIGGGFADGN--------SKGPLPMGTKPHCYSPFTNPSAAC 274 LKQTEVD EFLKKCCETLTDENRRL ELQ+LKALKL+QP YMHMPA TLTMCPSCER+GGG G+ +KG + TKP Y+PFTNPSAAC Sbjct: 180 LKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATLTMCPSCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRFYNPFTNPSAAC 278
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.282e-30 Identity = 67/108 (62.04%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERIGGG----------------FADGN-SKGPLPMGTKPHCYSPFTNPSAAC 274 LKQTEVD EFLKKCCETL DEN RL E+QELK LKL QP YMHMPA TLT CPSCERIGGG DG+ +KG + +KPH ++PFTNPSAAC Sbjct: 167 LKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.418e-23 Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERIGGGFADGNSKGPLPMGTKPHCYSPFTNPSAA 271 LKQTEVD E+LK+CCETLT+ENRRLH EL EL+ALK A+P YMH+PA TL+MCPSCER+ A ++ P SP P+AA Sbjct: 228 LKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAA------ATSPAAAPTAA 311
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 4.418e-23 Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERIGGGFADGNSKGPLPMGTKPHCYSPFTNPSAA 271 LKQTEVD E+LK+CCETLT+ENRRLH EL EL+ALK A+P YMH+PA TL+MCPSCER+ A ++ P SP P+AA Sbjct: 228 LKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAA------ATSPAAAPTAA 311
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.285e-22 Identity = 61/114 (53.51%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLA----------------QPLYMHMPAVTLTMCPSCERIGGG-------FADGNSKGPLPMGTKPHCYSPFTNPSAAC 274 LKQTEVD EFLK+CCETLT+ENRRL ELQEL+ALK A P YM +PA TLT+CPSCER+GG ADG GP T H ++PFT+ SAAC Sbjct: 181 LKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPASAAKVVAADGTKAGP-GRTTTHHFFNPFTH-SAAC 292
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.285e-22 Identity = 61/114 (53.51%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLA----------------QPLYMHMPAVTLTMCPSCERIGGG-------FADGNSKGPLPMGTKPHCYSPFTNPSAAC 274 LKQTEVD EFLK+CCETLT+ENRRL ELQEL+ALK A P YM +PA TLT+CPSCER+GG ADG GP T H ++PFT+ SAAC Sbjct: 181 LKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPASAAKVVAADGTKAGP-GRTTTHHFFNPFTH-SAAC 292
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.401e-21 Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERIGGGFADGNSKGPLPMGTKPHCYSPFTNPSAA 271 LKQTEVD E+LK+CCETLT+ENRRL EL EL+ALK P YMH+PA TL+MCPSCER+ A + T +P + AA Sbjct: 231 LKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAA 320
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.401e-21 Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERIGGGFADGNSKGPLPMGTKPHCYSPFTNPSAA 271 LKQTEVD E+LK+CCETLT+ENRRL EL EL+ALK P YMH+PA TL+MCPSCER+ A + T +P + AA Sbjct: 144 LKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAA 233
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.870e-19 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHM-PAVTLTMCPSCERIGGGFADGNSKGPLPMGTKP 235 LKQTEVD E+LK+CCE LTDENRRL E+ EL+ALKL+ LYMHM P TLTMCPSCER+ + + P+ + P Sbjct: 216 LKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSP 294
BLAST of CX300410 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 6.602e-19 Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 2 Query: 2 LKQTEVDWEFLKKCCETLTDENRRLHMELQELKALKLAQPLYMHMPAVTLTMCPSCERI 178 LKQTEVD E+LK+CCE+LT+ENRRL E++EL+ LK + P YM +PA TLTMCPSCER+ Sbjct: 244 LKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERV 302 The following BLAST results are available for this feature:
BLAST of CX300410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300410 ID=CX300410; Name=CX300410; organism=Citrus clementina; type=EST; length=442bpback to top |