CX300412

Overview
NameCX300412
Unique NameCX300412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length411
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10589 contig Ccv1_Contig10589:1079..1489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 6.761e-36
Identity = 69/126 (54.76%), Postives = 92/126 (73.02%), Query Frame = 3
Query:    3 ELRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDGTFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDG------IYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAV 362
            E+++M Y HAALSE++RLYPPVP+DSK   NDDVLPDG  V K   VTYH YAMGRM+S+WG++  E+ PERWLE        ++   + + +PVF AGPR+CLGK+MA++QMK I A ++ +F V
Sbjct:  356 EVKEMVYTHAALSESMRLYPPVPMDSKEAVNDDVLPDGWVVKKGTIVTYHVYAMGRMKSLWGDDWAEFRPERWLEKDEVNGKWVFVGRDSYSYPVFQAGPRVCLGKEMAFMQMKRIVAGIVGKFKV 481          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.476e-35
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 3
Query:    3 ELRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDGTFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWL---EDGIYRSENV--FRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAV 362
            E++DM Y HAAL E++RLYPP+PVD+K   +DDVLPDGT V K W VTYH YAMGR E IWG +  E+ PERWL   E G +    +  + +PVF AGPR+C+GK+MA++QMK + A ++ RF V
Sbjct:  354 EVKDMVYTHAALCESMRLYPPLPVDTKVAVHDDVLPDGTLVKKGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLSRDEVGKWSFVGIDYYSYPVFQAGPRVCIGKEMAFLQMKRVVAGIMGRFRV 478          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.476e-35
Identity = 78/140 (55.71%), Postives = 99/140 (70.71%), Query Frame = 3
Query:    3 ELRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDGTFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWL--EDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVI--ERFAVDVQHKDTCPEKVLSLT 410
            E+  + YL AALSETLRLYP VP DSK   NDD+LPDGTFV     VTY  YA GRM+S WGE+C E+ PERW+  +DG + + + +RF  F+AGPR+CLGKD+AY+QMK+IAA+V+   R  V   HK    E+ +SLT
Sbjct:  361 EVDRLVYLKAALSETLRLYPSVPEDSKHVVNDDILPDGTFVPAGSSVTYSIYAAGRMKSTWGEDCLEFKPERWISPDDGKFVNHDQYRFVAFNAGPRICLGKDLAYLQMKTIAAAVLLRHRLTVAPGHK---VEQKMSLT 497          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.665e-34
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 3
Query:    6 LRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDGTFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAVD-VQHKDTCPEKVLSL 407
            L  MHYLHA+LSETLRLYP +PVD K   N+D LPDG  V K   V +  YAMGRM  +WG++  E+ PERW++DGI+  ++ F+FP F AGPR CLGKD AY+QMK +AA ++  F  + V+ K+     +L+L
Sbjct:  366 LGKMHYLHASLSETLRLYPALPVDGKYVVNEDTLPDGFKVKKGDSVNFLPYAMGRMSYLWGDDAKEFKPERWIQDGIFHPKSPFKFPAFQAGPRTCLGKDFAYLQMKIVAAVLVRFFKFEAVKTKEVRYRTMLTL 500          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 5.014e-31
Identity = 67/117 (57.26%), Postives = 86/117 (73.50%), Query Frame = 3
Query:   21 YLHAALSETLRLYPPVPVDSKACRNDDVLPDGTFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSE---NVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAV 362
            YL AAL+ETLRLYP VP D K   +DDVLPDGTFV +   VTY  Y++GRM++IWGE+C E+ PERWL     R E   + ++F  F+AGPR CLGKD+AY QMKS+A++V+ R+ V
Sbjct:  363 YLKAALAETLRLYPSVPQDFKYVVDDDVLPDGTFVPRGSTVTYSIYSIGRMKTIWGEDCLEFRPERWLTADGERFETPKDGYKFVAFNAGPRTCLGKDLAYNQMKSVASAVLLRYRV 479          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: CP52L_DEBHA (Cytochrome P450 52A12 OS=Debaryomyces hansenii GN=CYP52A12 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.857e-15
Identity = 48/141 (34.04%), Postives = 68/141 (48.23%), Query Frame = 3
Query:    6 LRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDG--------TFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAVDVQHKDTCPEKVLS 404
            L+   YL A L+E LRLYP VP + +  + D  LP G         F+ K   VTY  YAM R E  +G++   + PERW E    +    + F  F+ GPR+CLG+  A  +   + A + + F     H D  P +  S
Sbjct:  366 LKKCEYLKALLNEVLRLYPSVPQNFRVAQKDTSLPRGGGPNRDQPIFIAKGQTVTYTVYAMHRDEQFYGKDSEVFRPERWFEPETRKLG--WAFLPFNGGPRICLGQQFALTEASYVIARLAQLFPNLASHDDEYPPRKAS 504          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: CP52E_CANMA (Cytochrome P450 52A5 OS=Candida maltosa GN=CYP52A5 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.593e-15
Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 3
Query:    6 LRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLP-----DGT---FVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAVDVQHKDT-----CPEKVLSLT 410
            L+   YL A L+ETLR+YP VPV+ +    D  LP     DGT   FV K   V Y  Y   R+E  +G++  E+ PERW E    +    + +  F+ GPR+CLG+  A  +    A+ VI R A   +H ++      P K + LT
Sbjct:  370 LKKCEYLKAVLNETLRMYPSVPVNFRTATRDTTLPRGGGKDGTSPIFVPKGSSVVYTVYKTHRLEEYYGKDAYEFRPERWFEPSTRKLG--WAYVPFNGGPRICLGQQFALTE----ASYVITRLAQMFEHLESKDETYPPNKCIHLT 511          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: CP52C_CANMA (Cytochrome P450 52A3 OS=Candida maltosa GN=CYP52A3 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 8.593e-15
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 3
Query:    6 LRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDG--------TFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAVDVQHKDTC--PEKVLSLT 410
            L+   YL A L+ETLR+YP VP++ +    D  LP G         FV K   V Y  Y   R++  +GE+  E+ PERW E    +    + +  F+ GPR+CLG+  A  +   + A + + F   ++ KD    P K + LT
Sbjct:  370 LKKCEYLKAVLNETLRMYPSVPINFRTATRDTTLPRGGGKDGNSPIFVPKGSSVVYSVYKTHRLKQFYGEDAYEFRPERWFEPSTRKLG--WAYLPFNGGPRICLGQQFALTEASYVIARLAQMFE-HLESKDETYPPNKCIHLT 511          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: CP52J_CANMA (Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A10 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 3
Query:    6 LRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLPDG--------TFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERF 356
            L+   YL A L+ETLRLYP VP +++    +  LP G          V K   V Y  YA+ R E  +G++ NE+ PERW E  + +    + F  F+ GPR+CLG+  A  +   + A +I+ F
Sbjct:  365 LKLCEYLKAVLNETLRLYPSVPRNARFAAKNTTLPHGGGPDGMSPILVRKGQTVMYSVYALQRDEKYYGKDANEFRPERWFEPEVRKLG--WAFLPFNGGPRICLGQQFALTEASYVLARLIQSF 487          
BLAST of CX300412 vs. ExPASy Swiss-Prot
Match: CP52F_CANTR (Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP52A6 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14
Identity = 47/148 (31.76%), Postives = 74/148 (50.00%), Query Frame = 3
Query:    6 LRDMHYLHAALSETLRLYPPVPVDSKACRNDDVLP--------DGTFVGKDWFVTYHAYAMGRMESIWGENCNEYLPERWLEDGIYRSENVFRFPVFHAGPRMCLGKDMAYIQMKSIAASVIERFAV-----DVQHKDTCPEKVLSLT 410
            L+   YL A L+ETLR+YP VPV+S+    D  LP        D  F+ K   V Y  Y   R+E  +G++ +++ PERW E    +    + +  F+ GPR+CLG+  A  +   +   +++ F       DV++    P K + LT
Sbjct:  371 LKRCEYLKAILNETLRMYPSVPVNSRTATRDTTLPRGGGPNGTDPIFIPKGSTVAYIVYKTHRLEEYYGKDADDFRPERWFEPSTKKLG--WAYVPFNGGPRICLGQQFALTEASYVITRLVQMFETVSSPPDVEYP---PPKCIHLT 513          
The following BLAST results are available for this feature:
BLAST of CX300412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
C94A1_VICSA6.761e-3654.76Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C94A2_VICSA7.476e-3555.20Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A2_ARATH7.476e-3555.71Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C04C1_PINTA1.665e-3451.85Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
C86A1_ARATH5.014e-3157.26Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
CP52L_DEBHA3.857e-1534.04Cytochrome P450 52A12 OS=Debaryomyces hansenii GN=... [more]
CP52E_CANMA8.593e-1535.81Cytochrome P450 52A5 OS=Candida maltosa GN=CYP52A5... [more]
CP52C_CANMA8.593e-1533.10Cytochrome P450 52A3 OS=Candida maltosa GN=CYP52A3... [more]
CP52J_CANMA1.122e-1436.00Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A... [more]
CP52F_CANTR1.122e-1431.76Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP5... [more]

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Properties
Property NameValue
Genbank descriptionC07010A01SK SaltLeaf1 Citrus clementina cDNA clone C07010A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300412 ID=CX300412; Name=CX300412; organism=Citrus clementina; type=EST; length=411bp
AGGAGTTGCGAGACATGCATTATTTGCATGCAGCGCTATCCGAGACGTTG
AGGCTGTACCCGCCGGTTCCGGTTGACTCGAAAGCTTGCCGGAACGACGA
TGTCTTGCCAGACGGTACATTTGTCGGAAAGGATTGGTTTGTTACTTATC
ATGCATATGCAATGGGGCGGATGGAGAGCATATGGGGAGAGAATTGCAAT
GAATATTTGCCGGAAAGGTGGCTGGAGGACGGAATTTATCGGTCGGAAAA
TGTGTTTCGGTTTCCGGTTTTTCACGCCGGGCCGAGGATGTGTCTTGGGA
AAGATATGGCTTACATTCAGATGAAATCAATAGCAGCGTCTGTGATTGAG
AGGTTTGCGGTTGACGTACAACATAAGGACACGTGTCCGGAGAAGGTATT
ATCTTTGACAC
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