CX300422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.905e-31 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGRTDT----KREVAAFFAHVTHETTDFCYIEEKNKADPHC--TSPQYPCANGKFYYGRGPIQLTGNGNY 412 +V ++VT FF+GIKNQA + CEGK FYTR AF++A+N+YP F T KRE+AAFFAHVTHET FCYI E NK++ +C ++ Q+PCA G+ YYGRGP+Q++ N NY Sbjct: 79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY 190
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.478e-30 Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEF----GRTDTKREVAAFFAHVTHETTDFCYIEEKNKADPHC--TSPQYPCANGKFYYGRGPIQLTGNGNY 412 +V +VT FF+GIKNQA + CEGK FYTR AF++A+ YP F + KRE+AAFFAH THET FCYI E NK++ +C T Q+PCA G+ YYGRGP+Q++ N NY Sbjct: 68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY 179
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.478e-30 Identity = 67/115 (58.26%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGRT----DTKREVAAFFAHVTHETTDFCYIEE-----KNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 SV +VTPEFF + QA C KGFYTRDAF+TA YP FGRT D+KRE+AAFFAH HET FCYIEE KN D TS Q+PC GK YYGRGP+Q++ N NY Sbjct: 67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDE--TSTQWPCMAGKGYYGRGPLQISWNFNY 179
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29 Identity = 63/109 (57.80%), Postives = 75/109 (68.81%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGRTDTKREVAAFFAHVTHETTDFCYIEEKNKAD-PHC--TSPQYPCANGKFYYGRGPIQLTGNGNY 412 SV +VT FF+GI NQA C GK FYTRD+FI A N++P F + T+RE+A FAH THET FCYIEE N A +C + QYPCA GK Y+GRGPIQL+ N NY Sbjct: 71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNY 179
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29 Identity = 63/114 (55.26%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGR----TDTKREVAAFFAHVTHETTDFCYIEEKN-KADPHC-TSPQYPCANGKFYYGRGPIQLTGNGNYIE 418 +V+D+VT EF+DGI +QA A C GK FYTR F+ A+++YP FG D KRE+AA+FAHVTHET CYIEE++ A+ +C S QYPC K Y+GRGP+QL+ N NYI+ Sbjct: 45 TVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYID 158
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.762e-28 Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 2 Query: 71 PGNVVCQNSVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGR----TDTKREVAAFFAHVTHETTDFCYIEEK--NKADPHC---TSPQYPCANGKFYYGRGPIQLTGNGNY 412 PG +SV+D+V+ FFDGI QA A+C GK FYTR AF++A++ P+FG D KRE+AAFFAH++HETT+ C+IEE+ + D +C + QYPCA GK YYGRGP+QL+ N NY Sbjct: 78 PGTGGGGSSVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY 198
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.696e-28 Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 92 NSVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGRT----DTKREVAAFFAHVTHETTDFCYIEEKNKAD-PHC---TSPQYPCANGKFYYGRGPIQLTGNGNY 412 N D++T +F +GI +QA + C GK FYTRDAF++ALNSY +FGR D+KRE+AA FAH THET FCYIEE + A +C + QYPC++ K Y+GRGPIQL+ N NY Sbjct: 66 NVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY 180
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.745e-28 Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGR----TDTKREVAAFFAHVTHETTDFCYIEEKNKAD-PHC--TSPQYPCANGKFYYGRGPIQLTGNGNY 412 SV +VT FF+GIKNQAP C GK FYTR +F+ A +SY F R D+KRE+AAFFAHVTHET CYI E N A +C + Q+PC GK YYGRGP+Q++ N NY Sbjct: 86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY 198
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 2.544e-27 Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFG----RTDTKREVAAFFAHVTHETTDFCYIEEKNKAD-PHC--TSPQYPCANGKFYYGRGPIQLTGNGNY 412 SV +VT FF+GIKNQAP C GK FYTR +F+ A SY F D+KRE+AAFFAHVTHET CYI E N A+ +C ++ Q+PC GK YYGRGP+Q++ N NY Sbjct: 83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY 195
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.928e-21 Identity = 51/124 (41.13%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 98 VTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNY 412 + +++ FD +K++ C KGFYT DAF+ A S+P FG T + KRE+AAF +HETT +C+++E+N + +C SP+YPCA GK YYGRGP+QL+ N NY Sbjct: 2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNY 125 The following BLAST results are available for this feature:
BLAST of CX300422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300422 ID=CX300422; Name=CX300422; organism=Citrus clementina; type=EST; length=418bpback to top |