CX300425

Overview
NameCX300425
Unique NameCX300425
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length434
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:1592..2025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  440 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  440 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  440 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  437 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.184e-33
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQ KAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMI+EYK
Sbjct:  440 STRIQFKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMIMEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.874e-33
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQ KAEGEGKFHSFHPVATILSYLTKAPLVP GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  440 STRIQFKAEGEGKFHSFHPVATILSYLTKAPLVPAGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 5.874e-33
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGE KFHSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  440 STRIQLKAEGEDKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 7.672e-33
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGE KFHSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  440 STRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.002e-32
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAEGE KFHSFHPVA+ILSYL+KAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  440 STRIQLKAEGESKFHSFHPVASILSYLSKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.309e-32
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 1
Query:    1 STRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQLKAE E KFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  442 STRIQLKAEEEDKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 512          
The following BLAST results are available for this feature:
BLAST of CX300425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
INO1_TOBAC2.385e-34100.00Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SESIN2.385e-34100.00Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA2.385e-34100.00Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_CITPA2.385e-34100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO2_ARATH1.184e-3397.18Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_WHEAT5.874e-3397.18Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_MAIZE5.874e-3395.77Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ORYSJ7.672e-3395.77Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_SPIPO1.002e-3295.77Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_MESCR1.309e-3297.18Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC07010B02SK SaltLeaf1 Citrus clementina cDNA clone C07010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300425 ID=CX300425; Name=CX300425; organism=Citrus clementina; type=EST; length=434bp
AGCACCAGGATCCAGCTCAAAGCTGAAGGAGAGGGCAAATTCCACTCTTT
CCACCCTGTGGCTACAATTCTCAGCTACCTCACCAAGGCTCCTCTGGTCC
CTCCAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTT
GAGAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGAT
TTTGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGT
TTTCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACT
GATTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTGTCCTG
TATGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATT
GCCTTTGTAGCTCATTTCGGAGCATGAAATCTCT
back to top