CX300428

Overview
NameCX300428
Unique NameCX300428
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length419
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12126 contig Ccv1_Contig12126:993..1411. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK2_ARATH (Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.943e-39
Identity = 78/134 (58.21%), Postives = 102/134 (76.12%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            ++AR+ I+SIW+ ADIIK+S+ E+ FLT G    DD     L+H NLKLLLVT G +GCRYYTKDF G V+   V+AVD TGAGD+FV  +L+Q+  D S+L++E++LR  LRFANACGA+T  ++GAIPALPT
Sbjct:  184 EEARKQIMSIWDKADIIKVSDVELEFLT-GNKTIDDETAMSLWHPNLKLLLVTLGENGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPALPT 316          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.878e-38
Identity = 76/134 (56.72%), Postives = 101/134 (75.37%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            D AREGILSIW+ AD IK+S++E++FLT+G D  D+  V  L+   LKLL+VT+G  GCRY+TKDF G V G KV+ VD TGAGDAFV  +L  ++ D S+   E++LR+AL+F+NACGA+   ++GAIPALPT
Sbjct:  191 DAAREGILSIWKEADFIKVSDDEVAFLTRG-DANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPT 323          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK5_ARATH (Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.217e-37
Identity = 78/134 (58.21%), Postives = 97/134 (72.39%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            + A EGI SIW  ADIIK+S++E++FLT+G+   DD VV  L H  LKLL+VT+G  GCRYYTK F GRV G  V+AVD TGAGD+FV   L  L  D S+L  E +L++AL FANACGA+   ++GAIPALPT
Sbjct:  179 EAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDD-VVLSLMHDKLKLLIVTDGEKGCRYYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGAIPALPT 311          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.590e-37
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            D AR GILSIW+ AD IK+S++E++FLTQG D  D+  V  L+   LKLL+VT+G  GCRY+TKDF G V G  V  VD TGAGDAFV  +L  ++ D S+   E++LR+AL+F+NACGA+   ++GAIPALPT
Sbjct:  191 DAARAGILSIWKEADFIKVSDDEVAFLTQG-DANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPT 323          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 1.590e-37
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            D AR GILSIW+ AD IK+S++E++FLTQG D  D+  V  L+   LKLL+VT+G  GCRY+TKDF G V G  V  VD TGAGDAFV  +L  ++ D S+   E++LR+AL+F+NACGA+   ++GAIPALPT
Sbjct:  191 DAARAGILSIWKEADFIKVSDDEVAFLTQG-DANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPT 323          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK4_ARATH (Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.626e-37
Identity = 75/138 (54.35%), Postives = 100/138 (72.46%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 418
            ++A++ ILSIW+ A++IK+S+EE+ FLT G D  DD     L+H+NLKLLLVT G  GCRYYTK F G V    V+AVD TGAGD+FV  +L ++  D ++L+ E +LR+ LR ANACGA+T  ++GAIPALPT   V
Sbjct:  183 EEAQKQILSIWDKAEVIKVSDEELMFLT-GSDKVDDETALSLWHSNLKLLLVTLGEKGCRYYTKSFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKKGAIPALPTESEV 319          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK1_ARATH (Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36
Identity = 74/134 (55.22%), Postives = 97/134 (72.39%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            ++A+  I+SIW+ A+IIK+S+ E+ FLT G +  DD     L+H NLKLLLVT G  GCRYYTK F G V    V AVD TGAGD+FV  +L+Q+  D S+L+ E++LR  LRFANACGA+T  ++GAIPALP+
Sbjct:  182 EEAKTQIMSIWDKAEIIKVSDVELEFLT-GSNKIDDETALTLWHPNLKLLLVTLGEKGCRYYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKGAIPALPS 314          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK3_ARATH (Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.488e-35
Identity = 74/134 (55.22%), Postives = 96/134 (71.64%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 406
            ++AR  I+SIW+ ADIIK+S+ E+ FLT+ +   DD     L+H NLKLLLVT G  GC Y+TK F G V+   V+AVD TGAGD+FV  +L Q+  D S+L+ E +LR  LRFANACGA+T  ++GAIPALPT
Sbjct:  183 EEARTQIMSIWDKADIIKVSDVELEFLTENKT-MDDKTAMSLWHPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPALPT 315          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35
Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 418
            ++AR  ILSIW+ ADI+K+SE E+ FLT G D  +D VV KL+   +KLLLVT G  GC+YY +DF G V   KV+ VD TGAGDAFV  +L ++  D S LQ + +L +A++FANACGA+T  ++GAIP+LPT   V
Sbjct:  180 EEARTKILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEV 316          
BLAST of CX300428 vs. ExPASy Swiss-Prot
Match: SCRK1_MAIZE (Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35
Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 2
Query:    5 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 418
            ++AR  ILSIW+ ADI+K+SE E+ FLT G D  +D VV KL+   +KLLLVT G  GC+YY +DF G V   KV+ VD TGAGDAFV  +L ++  D S LQ E +L ++++FANACGA+T  ++GAIP+LPT   V
Sbjct:  180 EEARTQILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFHGAVPSFKVQQVDTTGAGDAFVGALLQRIVKDPSSLQDEKKLVESIKFANACGAITTTKKGAIPSLPTEAEV 316          
The following BLAST results are available for this feature:
BLAST of CX300428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
SCRK2_ARATH4.943e-3958.21Probable fructokinase-2 OS=Arabidopsis thaliana GN... [more]
SCRK2_MAIZE1.878e-3856.72Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK5_ARATH1.217e-3758.21Putative fructokinase-5 OS=Arabidopsis thaliana GN... [more]
SCRK2_ORYSJ1.590e-3755.97Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI1.590e-3755.97Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK4_ARATH4.626e-3754.35Probable fructokinase-4 OS=Arabidopsis thaliana GN... [more]
SCRK1_ARATH5.115e-3655.22Probable fructokinase-1 OS=Arabidopsis thaliana GN... [more]
SCRK3_ARATH1.488e-3555.22Probable fructokinase-3 OS=Arabidopsis thaliana GN... [more]
SCRK1_ORYSJ2.539e-3553.62Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK1_MAIZE2.539e-3553.62Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC07010B05SK SaltLeaf1 Citrus clementina cDNA clone C07010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300428 ID=CX300428; Name=CX300428; organism=Citrus clementina; type=EST; length=419bp
AGCAGACAAAGCAAGAGAAGGAATTCTGAGCATTTGGGAGACTGCTGACA
TTATCAAGATCAGTGAAGAAGAGATTTCTTTTCTAACCCAAGGAGAAGAC
CCATATGATGATGCAGTCGTTTATAAACTATTTCATGCGAATCTTAAATT
GCTACTTGTCACCGAGGGTCCAGATGGTTGCAGGTACTACACCAAGGATT
TCAGCGGTAGAGTGCAGGGTTTGAAGGTAGAGGCTGTTGATGCCACTGGT
GCAGGGGATGCTTTTGTCGCTGGGATACTATCACAACTATCCACTGATTT
CTCCTTGCTTCAGAAAGAAGACCAATTAAGAGATGCTCTTAGGTTTGCTA
ATGCATGCGGTGCGCTGACTGTAATGGAGAGAGGTGCAATTCCGGCTTTG
CCCACAAGAGAAGCTGTGC
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