CX300477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 6.613e-39 Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 2 Query: 2 PVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGALG 259 P D AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG+ G Sbjct: 11 PGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.637e-39 Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 2 Query: 17 AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGAL 256 AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++N+IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG L Sbjct: 19 AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.677e-23 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 20 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 HINLKV GQD NEVFF+IK++T+ KLM YC RQ +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG Sbjct: 35 HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.457e-19 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGALGSG 265 ++ HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ G Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSASRG 97
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.820e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 ++ HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.820e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 ++ HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO3_BOVIN (Small ubiquitin-related modifier 3 OS=Bos taurus GN=SUMO3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.820e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA------LGSG 265 ++ HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ LGSG Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSRVASCLLGSG 103
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SMO2A_XENLA (Small ubiquitin-related modifier 2-A OS=Xenopus laevis GN=sumo2-A PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.928e-19 Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA 253 + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 13 ENNDHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO3_DANRE (Small ubiquitin-related modifier 3 OS=Danio rerio GN=sumo3 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.297e-18 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA 253 ++ HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 93
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO2_XENTR (Small ubiquitin-related modifier 2 OS=Xenopus tropicalis GN=sumo2 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.297e-18 Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA 253 + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 13 ENNDHINLKVAGQDGSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94 The following BLAST results are available for this feature:
BLAST of CX300477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300477 ID=CX300477; Name=CX300477; organism=Citrus clementina; type=EST; length=426bpback to top |