CX300488

Overview
NameCX300488
Unique NameCX300488
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig839 contig Ccv1_Contig839:1..635. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 277.715 bits (709), Expect = 3.409e-74
Identity = 127/198 (64.14%), Postives = 163/198 (82.32%), Query Frame = 2
Query:   41 MVVKVYGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            MV+ +Y P +AS KR +V L+EK + FET  VDL+KGE R PEYL +QPFG +PV+ DGD+ ++ESRAI+RY AEKYRSQG +LLGKT EERG VEQWL+VEA +YHPP+  +T+ ++FA  +G   DEK++K+SEEKL +VLDVYE +LSK++YLAGDF SLADL+HLPFT+YLVGP+ K ++I+DRKHVSAWWD I
Sbjct:    1 MVLTIYAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKI 198          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.196e-48
Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = 2
Query:   41 MVVKVYGPAYAS-PKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            MVVKVYG   A+ P+RV++C +EK IEFE   VDL K E + P++L  QPFG +P I+DG   L+ESRAI RYYA KY  QGT+LLGKT E R +V+QW+EVE + ++     + + ++F  K G   D  LV++ + K  KVLDVYE RL+ ++YL GD F+LADLSH+P  +Y++       ++  R++++ WW++I
Sbjct:    1 MVVKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEI 199          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.634e-42
Identity = 86/199 (43.22%), Postives = 124/199 (62.31%), Query Frame = 2
Query:   41 MVVKVYGPAYA-SPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            M +K++GPA + +  RVI  L EK ++FE  PV++  G+H+   ++ L PFG +P  +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  + P   ++T +++    LG+  D+  V ++EEKLGKVLDVYE RL  SKYL GD F+LADL H P   YL+G   K  +   R HVSAW  DI
Sbjct:    1 MGMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADI 198          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.494e-42
Identity = 86/199 (43.22%), Postives = 123/199 (61.81%), Query Frame = 2
Query:   41 MVVKVYG-PAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            M +KV+G P   +  RV  CLIEK ++FE  PVD++ GEH+   YL L PFG +P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   ++T +L     +G++ D+  VK+SE +L KVLD+YE RL++SKYL GD F+L DL H+P   YL+    KE +   R  VSAW  DI
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADI 198          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.869e-42
Identity = 86/199 (43.22%), Postives = 123/199 (61.81%), Query Frame = 2
Query:   41 MVVKVYG-PAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            M +KV+G P   +  RV  CLIEK+++FE  PVD+  GEH+   YL L PFG +P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++   +  W+EVE   + PP  ++T +L     +G++ D+  VK+SE +L KVLD+YE +L++SKYL GD F+L DL H+P   YL+    KE +   R  VSAW  DI
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCADI 198          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 3.804e-41
Identity = 87/198 (43.94%), Postives = 125/198 (63.13%), Query Frame = 2
Query:   41 MVVKVYG-PAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRY--YAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYL-AGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAW 622
            M +KV+G P   + +RV+V L EK +EFE  P+D+  G H+ P YL L PFG +P ++DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH + P   ++  +L+F    G+  D  +V+++E KL KVLDVYE RL++S+YL A D F+L DL HLP   YL+G   K+ +  +R HVSAW
Sbjct:    1 MTIKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAW 197          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 166.777 bits (421), Expect = 8.475e-41
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 2
Query:   47 VKVYG-PAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            +K+YG P   +  RV   L EK ++FE  PVDL  G H+ P++L L PFG +P + DGD  L+ESRAI RY A KY S+GT+LL  T     L E WLEVE+H++HP    +  QLL    LG + D  +V+K  E+L KVLDVYE  L+++KYLAGD F+LAD +H            +   +  R HV AWW+ I
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAI 199          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.561e-39
Identity = 88/200 (44.00%), Postives = 123/200 (61.50%), Query Frame = 2
Query:   47 VKVYGPAYASP-KRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGK-TTEERGLVEQWLEVEAHNYH----PPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWD 628
            VKV+GPA ++   RV++CL E   E+E   VD    EH++PE+LK  PFG +P  QDGD  L+ESRAI +Y   KY+++  +LL +    E  +V+ W EVE H Y+    P +YE  +     +  G+  ++K+V +S EKL KVL+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +     HV AWW+
Sbjct:    4 VKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIIN---PAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYAS-LFDSYPHVKAWWE 199          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.353e-38
Identity = 83/200 (41.50%), Postives = 123/200 (61.50%), Query Frame = 2
Query:   47 VKVYG-PAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELL---GKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            +KV+G PA  S +RV++ L EK ++FE   V+L  GEH+   +L   PFG +P  +DGD  L+ESRAI +Y A +Y +QGT LL    K   +  ++   ++VEAH + P   ++  + +F    GL+ D+ +V + E KL KVLDVYE RL + KYLAG+ F+L DL H+P  QYL+G   K+ +  +R  V+ W  +I
Sbjct:    4 IKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKK-LFTERPRVNEWVAEI 202          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 2.308e-38
Identity = 83/200 (41.50%), Postives = 123/200 (61.50%), Query Frame = 2
Query:   47 VKVYG-PAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELL---GKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 634
            +KV+G PA  + +RV++ L EK ++FE   V+L  GEH+   +L   PFG +P  +DGD  L+ESRAI +Y A +Y +QGT LL    K   +  ++   ++VE H + P   ++  + +F S  GL+ DE +V + E KL KVLDVYE RL + KYLAG+ F+L DL H+P  QYL+G   K+ +  +R  V+ W  +I
Sbjct:    4 IKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKK-LFTERPRVNEWVAEI 202          
The following BLAST results are available for this feature:
BLAST of CX300488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
GSTF3_ARATH3.409e-7464.14Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH4.196e-4847.24Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU2.634e-4243.22Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_TOBAC4.494e-4243.22Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_TOBAC5.869e-4243.22Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_SILCU3.804e-4143.94Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF3_MAIZE8.475e-4145.69Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF1_ORYSJ3.561e-3944.00Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GST16_ARATH1.353e-3841.50Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH2.308e-3841.50Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC07010G07SK SaltLeaf1 Citrus clementina cDNA clone C07010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300488 ID=CX300488; Name=CX300488; organism=Citrus clementina; type=EST; length=635bp
AGAGAAAAAGTTGAGAAAGAGAATAGCAAAAGCAACAACAATGGTGGTAA
AGGTGTATGGTCCAGCTTATGCTTCTCCCAAACGAGTGATTGTGTGCTTG
ATTGAGAAGCAAATCGAATTTGAAACTGCTCCCGTTGATCTCATCAAAGG
AGAGCATAGAAATCCTGAGTACCTCAAATTGCAGCCTTTCGGTGCTCTGC
CTGTCATTCAAGATGGAGATTTTACGTTATACGAATCTCGAGCTATCATA
AGGTACTACGCCGAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGAAA
AACAACTGAAGAAAGAGGCCTTGTGGAGCAATGGCTAGAGGTAGAGGCAC
ACAACTATCACCCACCAATTTACGAGATGACTGTGCAACTTTTATTTGCC
TCCAAGTTGGGACTTTCTGTTGATGAAAAATTGGTAAAGAAGAGTGAAGA
AAAACTTGGAAAAGTTCTTGATGTTTACGAGGAGAGGCTCTCAAAGAGCA
AGTATTTGGCAGGAGATTTCTTCAGCCTGGCTGATCTGAGTCACCTTCCA
TTTACTCAATACTTGGTTGGGCCGATGGAGAAGGAGTACATGATTAGAGA
CAGAAAGCATGTGAGTGCTTGGTGGGATGATATTA
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