CX300499

Overview
NameCX300499
Unique NameCX300499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length387
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9703 contig Ccv1_Contig9703:152..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX300499 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 3 
Query:    3 GSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 143
            GSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   20 GSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of CX300499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA1.515e-1161.70Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionC07010H08SK SaltLeaf1 Citrus clementina cDNA clone C07010H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300499 ID=CX300499; Name=CX300499; organism=Citrus clementina; type=EST; length=387bp
AGGGAAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTC
AGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTG
CAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACT
AATAAGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAA
TATTGTGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAAAGAAAA
ATTCTCTACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATG
TGCGTGTTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCAT
AATCATGTAATATATGGCCATGGCCATGACCGTGGCC
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