CX300502

Overview
NameCX300502
Unique NameCX300502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length380
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300502 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.738e-23
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 2 
Query:    2 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 157
            RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK
Sbjct:  219 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
[Close]
BLAST of CX300502 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.738e-23
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 2 
Query:    2 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 157
            RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK
Sbjct:  219 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
The following BLAST results are available for this feature:
BLAST of CX300502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CB12_SOLLC1.738e-2394.23Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB12_PETHY1.738e-2394.23Chlorophyll a-b binding protein, chloroplastic OS=... [more]
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Properties
Property NameValue
Genbank descriptionC07010H11SK SaltLeaf1 Citrus clementina cDNA clone C07010H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300502 ID=CX300502; Name=CX300502; organism=Citrus clementina; type=EST; length=380bp
GAGGACTAAGGAGATCAAGAATGGAAGATTGGCTATGTTGGCTGTGATGG
GTGCTTGGTTCCAGCACATTTACACCGGCACCGGCCCCATTGACAATCTC
ATTGCTCACCTTGCTGATCCTGGTCATGCCACCGTTTTTGCTGCCTTCAC
CCCCAAGTGAGATGATGACGAACAAAGGGAGAGAAATTTGGGCCAAGTGG
AAGCTTGAGATCAAAGGAATTGGTGTTTCTCTTAGGGAAAGGTTGTATGA
TTAGAACTTGTATTAATTGCCTCTATCTATGTACAAAGACTTGTGTGATC
ACTTAGATGCCATGAATATAAAAAATATTCAGGTGGAAAAAAAAAAAAAA
AAAAAAAATAAAAAAAAAAAAAAAAAAAAA
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