CX300513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLMU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia muridarum GN=kdsB PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34 Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPN-RVKCVVDNHGYAIY 585 S+ VGI+PAR+ SSRF GKPL ILGK +IQR++E + + +LD +VVATDD++I + +FG +MT ESC NGTER EA+ + + +IVVNIQGDEP + P IIDG+V+ L+ P +T VT DA N +VKCV D G A+Y Sbjct: 7 SKRVGILPARWGSSRFPGKPLAKILGKTLIQRSYENALTSRSLDCVVVATDDQRIFDHVVEFGGLCVMTCESCANGTERVEEAVSQHFPQAEIVVNIQGDEPCLSPSIIDGLVEMLEGNPAIDIATPVTETVDPDAILTNHKVKCVFDKTGRALY 161
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis GN=kdsB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.012e-34 Identity = 74/155 (47.74%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I + +FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P A T+VT + PE ++VKCV D +G A+Y Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADMVTSVTETTDPEAILTDHKVKCVFDKNGKALY 161
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=kdsB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.012e-34 Identity = 74/155 (47.74%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I + +FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P A T+VT + PE ++VKCV D +G A+Y Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADMVTSVTETTDPEAILTDHKVKCVFDKNGKALY 161
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLFF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=kdsB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.012e-34 Identity = 71/157 (45.22%), Postives = 104/157 (66.24%), Query Frame = 1 Query: 118 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD-AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 585 F S+ VG++PAR+ S RF GKPL NILGK +IQRT+E +TTLD +VVATD+++I + FG D +MTS C NGTER EA+ + + +I+VNIQGDEP ++ ++D +V+ L+ +P+ V + A + + +VKCV D +G A+Y Sbjct: 6 FASKKVGVLPARWGSVRFTGKPLANILGKSLIQRTYENISQSTTLDKVVVATDNQRIMDHVLDFGGDCVMTSPECANGTERTAEAISRYFPEAEIIVNIQGDEPCLQHTVVDTLVRKLEESPEIQVVTPAAKTTDSHEILTNQKVKCVFDKNGKALY 162
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=kdsB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.549e-34 Identity = 74/155 (47.74%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I + +FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P A T VT + PE ++VKCV D +G A+Y Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADMVTPVTETTDPEAILTDHKVKCVFDKNGKALY 161
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLT2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=kdsB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.549e-34 Identity = 74/155 (47.74%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I + +FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P A T VT + PE ++VKCV D +G A+Y Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADMVTPVTETTDPEAILTDHKVKCVFDKNGKALY 161
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLPN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia pneumoniae GN=kdsB PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32 Identity = 68/152 (44.74%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 133 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 +G++PAR+ SSR+ GKPL I GK +IQRT+E + ++ LD +VVATDD+ I + FG +MTS +C NGTER E +K K +I+VNIQGDEP + E++D +V+ L+++P+A T V + E+ +VKCV D+ G A+Y Sbjct: 11 IGVLPARWNSSRYPGKPLAKIHGKSLIQRTYENASQSSLLDKIVVATDDQHIIDHVTDFGGYAVMTSPTCSNGTERTGEVARKYFPKAEIIVNIQGDEPCLNSEVVDALVQKLRSSPEAELVTPVALTTDREEILTEKKVKCVFDSEGRALY 162
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PORG3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=kdsB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.691e-32 Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIY 585 + V+ IIPARFASSRF GKPL ++LGK MIQR ER +A + VVATDDE+I + + FG +V+MTS C +GTERC EA K+ + IV+N+QGDEP I+ E ID ++ A P+ +T + +F+ PN K V+D+ GYA+Y Sbjct: 3 TEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHER--IAGVVPRAVVATDDERIRQAVEDFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFD-KPETDIATLAEVFSSDASFERLNNPNSPKIVLDHGGYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_PORGI (3-deoxy-manno-octulosonate cytidylyltransferase OS=Porphyromonas gingivalis GN=kdsB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.783e-31 Identity = 73/158 (46.20%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 124 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIY 585 + V+ IIPARFASSRF GKPL ++LGK MIQR ER + + VVATDDE+I + + FG +V+MTS C +GTERC EA K+ + IV+N+QGDEP I+ E ID ++ A P+ +T + +F+ PN K V+D+ GYA+Y Sbjct: 3 TEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHER--IVGVVPRAVVATDDERIRQAVEDFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFD-KPETDIATLAEVFSSDVSFERLNNPNSPKIVLDHGGYALY 157
BLAST of CX300513 vs. ExPASy Swiss-Prot
Match: KDSB_CHLCV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydophila caviae GN=kdsB PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.328e-31 Identity = 65/157 (41.40%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 118 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIY 585 F S+ VG++PAR+ S+RF GKPL +ILGK +I+RT+E + LD ++VATDD++I + FG D ++TS C NGTER E + + + +I+VNIQGDEP ++ ++D +V+ L+ P+ T V + + +VKCV D +G A+Y Sbjct: 6 FASKKVGVLPARWGSARFTGKPLASILGKSLIRRTYENINQSIALDKVIVATDDQRIMDHVLDFGGDCVLTSPECANGTERTAETISRYFPEAEIIVNIQGDEPCLQHTVVDALVRKLEEFPEIQIVTPVAKTTDSHEILTNQKVKCVFDKNGKALY 162 The following BLAST results are available for this feature:
BLAST of CX300513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300513 ID=CX300513; Name=CX300513; organism=Citrus clementina; type=EST; length=586bpback to top |